RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	MRPL10	P36520	322 aa		3.68	□□□□□ -1.82
EBP2	YKL172W	KAP104	P38217	918 aa	Known RBP	3.68	□□□□□ -1.82
EBP2	YKL172W	AIM10	P39965	576 aa	Known RBP	3.68	□□□□□ -1.82
EBP2	YKL172W	YFR057W	P43625	151 aa		3.68	□□□□□ -1.82
EBP2	YKL172W	LCB3	P47013	409 aa		3.68	□□□□□ -1.82
EBP2	YKL172W	ASN2	P49090	572 aa	Known RBP	3.68	□□□□□ -1.82
EBP2	YKL172W	RTT102	P53330	157 aa		3.68	□□□□□ -1.82
EBP2	YKL172W	URC2	Q04411	772 aa		3.68	□□□□□ -1.82
EBP2	YKL172W	TPK3	P05986	398 aa		3.67	□□□□□ -1.82
EBP2	YKL172W	DPH5	P32469	300 aa	Predicted RBP	3.67	□□□□□ -1.82
EBP2	YKL172W	YKL097C	P34245	136 aa		3.67	□□□□□ -1.82
EBP2	YKL172W	MCR1	P36060	302 aa	Known RBP	3.67	□□□□□ -1.82
EBP2	YKL172W	MLH1	P38920	769 aa		3.67	□□□□□ -1.82
EBP2	YKL172W	GAB1	P41733	394 aa		3.67	□□□□□ -1.82
EBP2	YKL172W	MLC1	P53141	149 aa		3.67	□□□□□ -1.82
EBP2	YKL172W	MST27	P53176	234 aa		3.67	□□□□□ -1.82
EBP2	YKL172W	TRM112	P53738	135 aa	Predicted RBP	3.67	□□□□□ -1.82
EBP2	YKL172W	YLR152C	P54072	576 aa		3.67	□□□□□ -1.82
EBP2	YKL172W	ADD37	Q03233	198 aa		3.67	□□□□□ -1.82
EBP2	YKL172W	YOP1	Q12402	180 aa		3.67	□□□□□ -1.82
EBP2	YKL172W	RPL6B	P05739	176 aa	Known RBP	3.66	□□□□□ -1.82
EBP2	YKL172W	PFF1	P38244	976 aa		3.66	□□□□□ -1.82
EBP2	YKL172W	YHR131C	P38835	850 aa		3.66	□□□□□ -1.82
EBP2	YKL172W	UTP18	P40362	594 aa	Predicted RBP	3.66	□□□□□ -1.82
EBP2	YKL172W	CLD1	P53264	445 aa		3.66	□□□□□ -1.82
EBP2	YKL172W	MEH1	Q02205	184 aa		3.66	□□□□□ -1.82
EBP2	YKL172W	RPL6A	Q02326	176 aa	Known RBP	3.66	□□□□□ -1.82
EBP2	YKL172W	SMF3	Q12078	473 aa	Predicted RBP	3.66	□□□□□ -1.82
EBP2	YKL172W	OPI3	P05375	206 aa		3.65	□□□□□ -1.83
EBP2	YKL172W	AAT2	P23542	418 aa	Known RBP	3.65	□□□□□ -1.83
EBP2	YKL172W	NUP2	P32499	720 aa		3.65	□□□□□ -1.83
EBP2	YKL172W	YHK8	P38776	514 aa		3.65	□□□□□ -1.83
EBP2	YKL172W	MNL1	P38888	796 aa		3.65	□□□□□ -1.83
EBP2	YKL172W	BIR1	P47134	954 aa		3.65	□□□□□ -1.83
EBP2	YKL172W	ERO1	Q03103	563 aa		3.65	□□□□□ -1.83
EBP2	YKL172W	ECM7	Q06200	448 aa		3.65	□□□□□ -1.83
EBP2	YKL172W	IPK1	Q06667	281 aa		3.65	□□□□□ -1.83
EBP2	YKL172W	YDL114W	Q07530	308 aa		3.65	□□□□□ -1.83
EBP2	YKL172W	YCR024C-B	Q3E7Z8	88 aa		3.65	□□□□□ -1.83
EBP2	YKL172W	SSC1	P0CS90	654 aa	Known RBP	3.64	□□□□□ -1.83
EBP2	YKL172W	RTC2	P38279	296 aa		3.64	□□□□□ -1.83
EBP2	YKL172W	DFG10	P40526	253 aa		3.64	□□□□□ -1.83
EBP2	YKL172W	EPL1	P43572	832 aa		3.64	□□□□□ -1.83
EBP2	YKL172W	TDA1	Q03533	586 aa		3.64	□□□□□ -1.83
EBP2	YKL172W	RRP7	P25368	297 aa	Predicted RBP	3.63	□□□□□ -1.83
EBP2	YKL172W	PRS1	P32895	427 aa	Known RBP	3.63	□□□□□ -1.83
EBP2	YKL172W	SPT10	P35208	640 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	YBL028C	P38202	106 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	WSS1	P38838	269 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	AIP1	P46680	615 aa	Known RBP	3.63	□□□□□ -1.83
EBP2	YKL172W	PMT5	P52867	743 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	RRN9	P53437	365 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	COS1	P53822	381 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	ASA1	Q06822	443 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	YFH1	Q07540	174 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	NOP6	Q07623	225 aa	Known RBP	3.63	□□□□□ -1.83
EBP2	YKL172W	LDS2	Q08218	356 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	YDR061W	Q12298	539 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	AHC1	Q12433	566 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	PCL9	Q12477	304 aa		3.63	□□□□□ -1.83
EBP2	YKL172W	MEX67	Q99257	599 aa	Known RBP	3.63	□□□□□ -1.83
EBP2	YKL172W	NOP1	P15646	327 aa	Known RBP	3.62	□□□□□ -1.83
EBP2	YKL172W	HXT1	P32465	570 aa		3.62	□□□□□ -1.83
EBP2	YKL172W	GPX2	P38143	162 aa		3.62	□□□□□ -1.83
EBP2	YKL172W	RXT2	P38255	430 aa		3.62	□□□□□ -1.83
EBP2	YKL172W	MIG3	P39943	394 aa		3.62	□□□□□ -1.83
EBP2	YKL172W	TIS11	P47977	285 aa		3.62	□□□□□ -1.83
EBP2	YKL172W	EOS1	P53938	366 aa		3.62	□□□□□ -1.83
EBP2	YKL172W	YPR091C	Q06833	770 aa		3.62	□□□□□ -1.83
EBP2	YKL172W	RNA1	P11745	407 aa	Known RBP	3.61	□□□□□ -1.83
EBP2	YKL172W	GEP4	P38812	185 aa		3.61	□□□□□ -1.83
EBP2	YKL172W	OXA1	P39952	402 aa		3.61	□□□□□ -1.83
EBP2	YKL172W	YNL208W	P40159	199 aa	Known RBP	3.61	□□□□□ -1.83
EBP2	YKL172W	EGT2	P42835	1041 aa		3.61	□□□□□ -1.83
EBP2	YKL172W	TOS2	P50078	622 aa		3.61	□□□□□ -1.83
EBP2	YKL172W	YIP5	P53108	310 aa		3.61	□□□□□ -1.83
EBP2	YKL172W	HAL1	Q01766	294 aa		3.61	□□□□□ -1.83
EBP2	YKL172W	SKS1	Q12505	502 aa		3.61	□□□□□ -1.83
EBP2	YKL172W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.61	□□□□□ -1.83
EBP2	YKL172W	MRPL8	P22353	238 aa		3.6	□□□□□ -1.83
EBP2	YKL172W	FUN26	P31381	517 aa		3.6	□□□□□ -1.83
EBP2	YKL172W	TIR2	P33890	251 aa		3.6	□□□□□ -1.83
EBP2	YKL172W	PTI1	P39927	425 aa	Predicted RBP	3.6	□□□□□ -1.83
EBP2	YKL172W	ATG18	P43601	500 aa		3.6	□□□□□ -1.83
EBP2	YKL172W	BNS1	P50084	137 aa		3.6	□□□□□ -1.83
EBP2	YKL172W	CRH1	P53301	507 aa		3.6	□□□□□ -1.83
EBP2	YKL172W	YMR010W	Q03687	405 aa		3.6	□□□□□ -1.83
EBP2	YKL172W	FCY22	Q12119	530 aa		3.6	□□□□□ -1.83
EBP2	YKL172W	TOA2	P32774	122 aa		3.59	□□□□□ -1.83
EBP2	YKL172W	ANR2	P36090	516 aa	Predicted RBP	3.59	□□□□□ -1.83
EBP2	YKL172W	DAD2	P36162	133 aa		3.59	□□□□□ -1.83
EBP2	YKL172W	SPP381	P38282	291 aa	Predicted RBP	3.59	□□□□□ -1.83
EBP2	YKL172W	YET2	Q04210	160 aa		3.59	□□□□□ -1.83
EBP2	YKL172W	LIP2	Q06005	328 aa		3.59	□□□□□ -1.83
EBP2	YKL172W	NAG1	Q8TGN9	163 aa		3.59	□□□□□ -1.83
EBP2	YKL172W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
EBP2	YKL172W	PCL1	P24867	279 aa		3.58	□□□□□ -1.84
EBP2	YKL172W	MSP1	P28737	362 aa		3.58	□□□□□ -1.84
EBP2	YKL172W	BLI1	P35727	113 aa		3.58	□□□□□ -1.84
EBP2	YKL172W	ECM8	P38246	354 aa		3.58	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms