RNA–Protein interactions for RNA: YKL088W

CAB3, Transcript of Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis, yeast

Gene CAB3, Length 1,716 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAB3	YKL088W	BZZ1	P38822	633 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	AIM18	P38884	321 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	YHB1	P39676	399 aa	Known RBP	4.55	□□□□□ -1.68
CAB3	YKL088W	ECM10	P39987	644 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	CIN1	P40987	1014 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	MIG2	P53035	382 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	USE1	P53146	245 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	YGR067C	P53243	804 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	YNL134C	P53912	376 aa	Known RBP	4.55	□□□□□ -1.68
CAB3	YKL088W	RNY1	Q02933	434 aa	Known RBP	4.55	□□□□□ -1.68
CAB3	YKL088W	ACF2	Q12168	779 aa		4.55	□□□□□ -1.68
CAB3	YKL088W	YAP1	P19880	650 aa	Known RBP	4.54	□□□□□ -1.68
CAB3	YKL088W	VPS3	P23643	1011 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	SPS22	P25380	463 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	RSA4	P25382	515 aa	Known RBP	4.54	□□□□□ -1.68
CAB3	YKL088W	BOS1	P25385	244 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	RAD14	P28519	371 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	RIM1	P32445	135 aa	Known RBP	4.54	□□□□□ -1.68
CAB3	YKL088W	ASF2	P32448	525 aa	Predicted RBP	4.54	□□□□□ -1.68
CAB3	YKL088W	DOA4	P32571	926 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	CYM1	P32898	989 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	YKL063C	P35725	167 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	VPS51	P36116	164 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	DRE2	P36152	348 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	ASC1	P38011	319 aa	Known RBP	4.54	□□□□□ -1.68
CAB3	YKL088W	RIM2	P38127	377 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	YBR242W	P38331	238 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	AIM10	P39965	576 aa	Known RBP	4.54	□□□□□ -1.68
CAB3	YKL088W	ALD5	P40047	520 aa	Known RBP	4.54	□□□□□ -1.68
CAB3	YKL088W	SYG1	P40528	902 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	YFL066C	P43538	392 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	YFR020W	P43600	232 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	MDV1	P47025	714 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	MUP1	P50276	574 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	BUD17	P53727	317 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	OCA2	P53949	197 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	STP1	Q00947	519 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	YPL062W	Q02781	134 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	YMR209C	Q03648	457 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	SEG1	Q04279	960 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	RXT3	Q07458	294 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	NRT1	Q08485	598 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	MRH1	Q12117	320 aa	Predicted RBP	4.54	□□□□□ -1.68
CAB3	YKL088W	RBD2	Q12270	262 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	ADF1	Q2V2Q1	113 aa		4.54	□□□□□ -1.68
CAB3	YKL088W	LEU4	P06208	619 aa	Known RBP	4.53	□□□□□ -1.68
CAB3	YKL088W	SAG1	P20840	650 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	ELO2	P25358	347 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	PMI40	P29952	429 aa	Known RBP	4.53	□□□□□ -1.68
CAB3	YKL088W	KKQ8	P36004	724 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	SRL3	P36167	246 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	YBR053C	P38235	358 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	SHE3	P38272	425 aa	Known RBP	4.53	□□□□□ -1.68
CAB3	YKL088W	YHL026C	P38740	315 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	YHC3	P47040	408 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	EMC2	P47133	292 aa	Known RBP	4.53	□□□□□ -1.68
CAB3	YKL088W	UBC11	P52492	156 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	YIP4	P53093	235 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	MRM2	P53123	320 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	COQ6	P53318	479 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	KTR6	P54070	446 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	OSH6	Q02201	448 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	DML1	Q03652	475 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	ATC1	Q04005	294 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	YML053C	Q04978	212 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	YDL086W	Q07505	273 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	TEN1	Q07921	160 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	LOT6	Q07923	191 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	LDB17	Q12342	491 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	YKL033W-A	Q86ZR7	236 aa		4.53	□□□□□ -1.68
CAB3	YKL088W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
CAB3	YKL088W	CAR2	P07991	424 aa	Known RBP	4.52	□□□□□ -1.69
CAB3	YKL088W	DSF1	P0CX08	502 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	YNR073C	P0CX09	502 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	YCL068C	P25593	260 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	SIN4	P32259	974 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	COQ2	P32378	372 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	CSE2	P33308	149 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	SIP2	P34164	415 aa	Known RBP	4.52	□□□□□ -1.69
CAB3	YKL088W	YBR139W	P38109	508 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	PEX32	P38292	413 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	TSC10	P38342	320 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	PHO89	P38361	574 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	YAT2	P40017	923 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	YIL001W	P40560	513 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	GCN20	P43535	752 aa	Known RBP	4.52	□□□□□ -1.69
CAB3	YKL088W	LOC1	P43586	204 aa	Predicted RBP	4.52	□□□□□ -1.69
CAB3	YKL088W	AZR1	P50080	613 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	PEX31	P53203	462 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	RCF2	P53721	224 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	GIM3	P53900	129 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	SMA2	Q04658	369 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	SYO1	Q07395	620 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	DDC1	Q08949	612 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	TGS1	Q12052	315 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	EFG1	Q3E705	233 aa	Known RBP	4.52	□□□□□ -1.69
CAB3	YKL088W	RGS2	Q99188	309 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	RPL24A	P04449	155 aa	Known RBP	4.52	□□□□□ -1.69
CAB3	YKL088W	ABF1	P14164	731 aa		4.52	□□□□□ -1.69
CAB3	YKL088W	HRR25	P29295	494 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 120.7 ms