RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeast

Gene RPB4, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB4	YJL140W	JLP1	Q12358	412 aa		4.87	□□□□□ -1.63
RPB4	YJL140W	ARG3	P05150	338 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	BCY1	P07278	416 aa	Known RBP	4.86	□□□□□ -1.63
RPB4	YJL140W	FUM1	P08417	488 aa	Known RBP	4.86	□□□□□ -1.63
RPB4	YJL140W	OCA4	P25366	362 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	CSM1	P25651	190 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	PHO91	P27514	894 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	BUD14	P27637	709 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	COX13	P32799	129 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
RPB4	YJL140W	RPS1A	P33442	255 aa	Known RBP	4.86	□□□□□ -1.63
RPB4	YJL140W	APL3	P38065	1025 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	BEM4	P39011	633 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	EMP65	P40085	556 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	IAH1	P41734	238 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	MPS3	P47069	682 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	YGL260W	P53056	76 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	GET1	P53192	235 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	YNL033W	P53964	284 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	YNL019C	P53975	284 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	ECM9	Q02202	377 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	GGA1	Q06336	557 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	RAD34	Q06665	692 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	YLR413W	Q06689	675 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	GRS2	Q06817	618 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	DIN7	Q12086	430 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	NSL1	Q12143	216 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	LAG2	Q92325	660 aa		4.86	□□□□□ -1.63
RPB4	YJL140W	CLB4	P24871	460 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	IMG1	P25626	169 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	CRM1	P30822	1084 aa	Known RBP	4.85	□□□□□ -1.63
RPB4	YJL140W	YPT7	P32939	208 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	RMA1	P36001	430 aa	Known RBP	4.85	□□□□□ -1.63
RPB4	YJL140W	MRPL17	P36528	281 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	ROT2	P38138	954 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	SLM4	P38247	162 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	IST2	P38250	946 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	UBA4	P38820	440 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	FAD1	P38913	306 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	ECM10	P39987	644 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	IMA5	P40884	581 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	SNM1	P40993	198 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	ELP2	P42935	788 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	BIT61	P47041	543 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	IKS1	P47042	667 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	NAS6	P50086	228 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	GPI1	P53306	609 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	ESF2	P53743	316 aa	Known RBP	4.85	□□□□□ -1.63
RPB4	YJL140W	SKI8	Q02793	397 aa	Predicted RBP	4.85	□□□□□ -1.63
RPB4	YJL140W	PEX25	Q02969	394 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	YMR010W	Q03687	405 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	VBA4	Q04602	768 aa	Known RBP	4.85	□□□□□ -1.63
RPB4	YJL140W	BCH1	Q05029	724 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	RRP45	Q05636	305 aa	Known RBP	4.85	□□□□□ -1.63
RPB4	YJL140W	YHC1	Q05900	231 aa	Known RBP	4.85	□□□□□ -1.63
RPB4	YJL140W	YDL121C	Q07541	149 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	UAF30	Q08747	228 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	MUM3	Q08750	479 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	YOR012W	Q12351	137 aa		4.85	□□□□□ -1.63
RPB4	YJL140W	THP2	O13539	261 aa	Known RBP	4.84	□□□□□ -1.63
RPB4	YJL140W	MSS18	P08593	268 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	SUI3	P09064	285 aa	Known RBP	4.84	□□□□□ -1.63
RPB4	YJL140W	KAR1	P11927	433 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	MSS116	P15424	664 aa	Known RBP	4.84	□□□□□ -1.63
RPB4	YJL140W	FRS1	P15624	595 aa	Known RBP	4.84	□□□□□ -1.63
RPB4	YJL140W	MET8	P15807	274 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	UGA1	P17649	471 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	ATP7	P30902	174 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	ORC2	P32833	620 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	UGP1	P32861	499 aa	Known RBP	4.84	□□□□□ -1.63
RPB4	YJL140W	YKL100C	P34248	587 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	FRE2	P36033	711 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	FTH1	P38310	465 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	GVP36	P40531	326 aa	Known RBP	4.84	□□□□□ -1.63
RPB4	YJL140W	FMP32	P43557	207 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	YJR030C	P47101	745 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	GTO1	P48239	356 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	UPF3	P48412	387 aa	Known RBP	4.84	□□□□□ -1.63
RPB4	YJL140W	TRM9	P49957	279 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	DIA3	P52290	468 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	MPS1	P54199	764 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	MET31	Q03081	177 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	YMR210W	Q03649	449 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	RAD33	Q04231	177 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	YDR124W	Q04608	324 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	GMC2	Q06201	188 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	YDR056C	Q12025	205 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	ULA1	Q12059	462 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	LEU9	Q12166	604 aa	Known RBP	4.84	□□□□□ -1.63
RPB4	YJL140W	YCL012C	Q8J0M4	134 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	SRN2	Q99176	213 aa		4.84	□□□□□ -1.63
RPB4	YJL140W	RAS2	P01120	322 aa	Known RBP	4.83	□□□□□ -1.64
RPB4	YJL140W	LEU4	P06208	619 aa	Known RBP	4.83	□□□□□ -1.64
RPB4	YJL140W	STE3	P06783	470 aa		4.83	□□□□□ -1.64
RPB4	YJL140W	FUR1	P18562	216 aa	Known RBP	4.83	□□□□□ -1.64
RPB4	YJL140W	SGV1	P23293	657 aa	Known RBP	4.83	□□□□□ -1.64
RPB4	YJL140W	RVS161	P25343	265 aa	Known RBP	4.83	□□□□□ -1.64
RPB4	YJL140W	SPB1	P25582	841 aa	Predicted RBP	4.83	□□□□□ -1.64
RPB4	YJL140W	SEC17	P32602	292 aa		4.83	□□□□□ -1.64
RPB4	YJL140W	YME2	P32843	850 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms