RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C CEM1P39525 442 aa4.46□□□□□ -1.7
PAN1YIR006C BOL3P39724 118 aa4.46□□□□□ -1.7
PAN1YIR006C APQ12P40532 138 aa4.46□□□□□ -1.7
PAN1YIR006C DIA3P52290 468 aa4.46□□□□□ -1.7
PAN1YIR006C TGL2P54857 326 aa4.46□□□□□ -1.7
PAN1YIR006C ISU1Q03020 165 aa4.46□□□□□ -1.7
PAN1YIR006C RTN1Q04947 295 aaKnown RBP4.46□□□□□ -1.7
PAN1YIR006C ACF2Q12168 779 aa4.46□□□□□ -1.7
PAN1YIR006C LPX1Q12405 387 aaKnown RBP4.46□□□□□ -1.7
PAN1YIR006C YEL009C-AA0A023PZF2 135 aa4.45□□□□□ -1.7
PAN1YIR006C HOM2P13663 365 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C STF2P16965 84 aa4.45□□□□□ -1.7
PAN1YIR006C RRP7P25368 297 aaPredicted RBP4.45□□□□□ -1.7
PAN1YIR006C CYS3P31373 394 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C HOG1P32485 435 aa4.45□□□□□ -1.7
PAN1YIR006C WBP1P33767 430 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C TCD2P36101 447 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C TRM7P38238 310 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C IDP2P41939 412 aa4.45□□□□□ -1.7
PAN1YIR006C YGR210CP42942 411 aa4.45□□□□□ -1.7
PAN1YIR006C ALR2P43553 858 aa4.45□□□□□ -1.7
PAN1YIR006C RPA34P47006 233 aaPredicted RBP4.45□□□□□ -1.7
PAN1YIR006C ELA1P53861 379 aaPredicted RBP4.45□□□□□ -1.7
PAN1YIR006C GRX5Q02784 150 aa4.45□□□□□ -1.7
PAN1YIR006C RRG7Q08774 242 aaPredicted RBP4.45□□□□□ -1.7
PAN1YIR006C MRH1Q12117 320 aaPredicted RBP4.45□□□□□ -1.7
PAN1YIR006C RRP12Q12754 1228 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C YBR284WP38150 797 aa4.45□□□□□ -1.7
PAN1YIR006C RRN10P38204 145 aa4.45□□□□□ -1.7
PAN1YIR006C TSL1P38427 1098 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C YHR127WP38833 243 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C YJL193WP39542 402 aa4.45□□□□□ -1.7
PAN1YIR006C PZF1P39933 429 aa4.45□□□□□ -1.7
PAN1YIR006C FAU1P40099 211 aa4.45□□□□□ -1.7
PAN1YIR006C ELO3P40319 345 aa4.45□□□□□ -1.7
PAN1YIR006C NEO1P40527 1151 aa4.45□□□□□ -1.7
PAN1YIR006C GTS1P40956 396 aa4.45□□□□□ -1.7
PAN1YIR006C APS3P47064 194 aa4.45□□□□□ -1.7
PAN1YIR006C CSL4P53859 292 aaPredicted RBP4.45□□□□□ -1.7
PAN1YIR006C HER2Q03557 464 aa4.45□□□□□ -1.7
PAN1YIR006C DML1Q03652 475 aa4.45□□□□□ -1.7
PAN1YIR006C CTK1Q03957 528 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C PUN1Q06991 263 aa4.45□□□□□ -1.7
PAN1YIR006C TAO3P40468 2376 aa4.45□□□□□ -1.7
PAN1YIR006C FRS1P15624 595 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C HXT4P32467 576 aa4.45□□□□□ -1.7
PAN1YIR006C SRB5P32585 307 aa4.45□□□□□ -1.7
PAN1YIR006C TAE1P38340 232 aa4.45□□□□□ -1.7
PAN1YIR006C HXT6P39003 570 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C HXT7P39004 570 aa4.45□□□□□ -1.7
PAN1YIR006C AAD14P42884 376 aa4.45□□□□□ -1.7
PAN1YIR006C CAK1P43568 368 aaPredicted RBP4.45□□□□□ -1.7
PAN1YIR006C BFA1P47113 574 aa4.45□□□□□ -1.7
PAN1YIR006C PRM15Q03262 622 aa4.45□□□□□ -1.7
PAN1YIR006C YLR345WQ06137 509 aa4.45□□□□□ -1.7
PAN1YIR006C YPR196WQ06595 470 aa4.45□□□□□ -1.7
PAN1YIR006C CET1O13297 549 aaPredicted RBP4.45□□□□□ -1.7
PAN1YIR006C ATP6P00854 259 aa4.45□□□□□ -1.7
PAN1YIR006C PHO91P27514 894 aa4.45□□□□□ -1.7
PAN1YIR006C PDC2P32896 925 aa4.45□□□□□ -1.7
PAN1YIR006C SFC1P33303 322 aa4.45□□□□□ -1.7
PAN1YIR006C MKS1P34072 584 aa4.45□□□□□ -1.7
PAN1YIR006C EMC3P36039 253 aa4.45□□□□□ -1.7
PAN1YIR006C YBR285WP38354 144 aa4.45□□□□□ -1.7
PAN1YIR006C AIM2P39721 246 aa4.45□□□□□ -1.7
PAN1YIR006C FAF1P40546 346 aaPredicted RBP4.45□□□□□ -1.7
PAN1YIR006C RTS2P40962 232 aa4.45□□□□□ -1.7
PAN1YIR006C MCM22P47167 239 aa4.45□□□□□ -1.7
PAN1YIR006C YGR066CP53242 292 aa4.45□□□□□ -1.7
PAN1YIR006C DAM1P53267 343 aa4.45□□□□□ -1.7
PAN1YIR006C SRP1Q02821 542 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C RAD34Q06665 692 aa4.45□□□□□ -1.7
PAN1YIR006C YOR283WQ12040 230 aaKnown RBP4.45□□□□□ -1.7
PAN1YIR006C ATP16Q12165 160 aa4.45□□□□□ -1.7
PAN1YIR006C CAN1P04817 590 aa4.44□□□□□ -1.7
PAN1YIR006C LEU4P06208 619 aaKnown RBP4.44□□□□□ -1.7
PAN1YIR006C NAM2P11325 894 aa4.44□□□□□ -1.7
PAN1YIR006C MDH1P17505 334 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
PAN1YIR006C NDC1P32500 655 aa4.44□□□□□ -1.7
PAN1YIR006C ISC1P40015 477 aaKnown RBP4.44□□□□□ -1.7
PAN1YIR006C NTA1P40354 457 aa4.44□□□□□ -1.7
PAN1YIR006C HOC1P47124 396 aa4.44□□□□□ -1.7
PAN1YIR006C EMC4P53073 190 aa4.44□□□□□ -1.7
PAN1YIR006C GPG1P53130 126 aa4.44□□□□□ -1.7
PAN1YIR006C ALG9P53868 555 aaKnown RBP4.44□□□□□ -1.7
PAN1YIR006C UTP21Q06078 939 aaPredicted RBP4.44□□□□□ -1.7
PAN1YIR006C CDA2Q06703 312 aa4.44□□□□□ -1.7
PAN1YIR006C YOL036WQ08206 761 aa4.44□□□□□ -1.7
PAN1YIR006C YOR214CQ12282 236 aa4.44□□□□□ -1.7
PAN1YIR006C PNS1Q12412 539 aa4.44□□□□□ -1.7
PAN1YIR006C NSI1Q12457 570 aa4.44□□□□□ -1.7
PAN1YIR006C YPR064WQ12492 139 aa4.44□□□□□ -1.7
PAN1YIR006C RPP2BP02400 110 aaKnown RBP4.44□□□□□ -1.7
PAN1YIR006C MTF1P14908 341 aaKnown RBP4.44□□□□□ -1.7
PAN1YIR006C UGA1P17649 471 aa4.44□□□□□ -1.7
PAN1YIR006C KGD1P20967 1014 aaKnown RBP4.44□□□□□ -1.7
PAN1YIR006C DHR2P36009 735 aaPredicted RBP4.44□□□□□ -1.7
PAN1YIR006C SPO73P40031 143 aa4.44□□□□□ -1.7
PAN1YIR006C YIR016WP40572 265 aa4.44□□□□□ -1.7
PAN1YIR006C PUS4P48567 403 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms