RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C GMH1P36125 273 aa3.08□□□□□ -1.92
XRN1YGL173C YMC2P38087 329 aa3.08□□□□□ -1.92
XRN1YGL173C VHC1P38329 1120 aa3.08□□□□□ -1.92
XRN1YGL173C HAT2P39984 401 aa3.08□□□□□ -1.92
XRN1YGL173C YER034WP40022 185 aaKnown RBP3.08□□□□□ -1.92
XRN1YGL173C GPI15P53961 229 aa3.08□□□□□ -1.92
XRN1YGL173C YPR172WQ06608 200 aa3.08□□□□□ -1.92
XRN1YGL173C RPN8Q08723 338 aaKnown RBP3.08□□□□□ -1.92
XRN1YGL173C FMP16Q12497 93 aa3.08□□□□□ -1.92
XRN1YGL173C RPL35AP0CX84 120 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C RPL35BP0CX85 120 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C EXO70P19658 623 aa3.07□□□□□ -1.92
XRN1YGL173C FAR1P21268 830 aa3.07□□□□□ -1.92
XRN1YGL173C GID7P25569 745 aa3.07□□□□□ -1.92
XRN1YGL173C PEX3P28795 441 aa3.07□□□□□ -1.92
XRN1YGL173C ALD5P40047 520 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C DSN1P40568 576 aa3.07□□□□□ -1.92
XRN1YGL173C UBP8P50102 471 aa3.07□□□□□ -1.92
XRN1YGL173C YGL114WP53134 725 aa3.07□□□□□ -1.92
XRN1YGL173C YGR151CP53287 111 aa3.07□□□□□ -1.92
XRN1YGL173C STD1Q02794 444 aa3.07□□□□□ -1.92
XRN1YGL173C RVB1Q03940 463 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C PCL8Q08966 492 aa3.07□□□□□ -1.92
XRN1YGL173C MER1P16523 270 aa3.07□□□□□ -1.92
XRN1YGL173C GBP2P25555 427 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
XRN1YGL173C SUA5P32579 426 aa3.07□□□□□ -1.92
XRN1YGL173C EMP70P32802 667 aa3.07□□□□□ -1.92
XRN1YGL173C AIM26P32858 118 aa3.07□□□□□ -1.92
XRN1YGL173C TCM62P38228 572 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C SLX1P38324 304 aa3.07□□□□□ -1.92
XRN1YGL173C YIP4P53093 235 aa3.07□□□□□ -1.92
XRN1YGL173C TIM21P53220 239 aa3.07□□□□□ -1.92
XRN1YGL173C THI3Q07471 609 aa3.07□□□□□ -1.92
XRN1YGL173C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
XRN1YGL173C SLF1Q12034 447 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C ACF2Q12168 779 aa3.07□□□□□ -1.92
XRN1YGL173C RDL1Q12305 139 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C RPN13O13563 156 aa3.07□□□□□ -1.92
XRN1YGL173C DAL82P21705 255 aa3.07□□□□□ -1.92
XRN1YGL173C RFA2P26754 273 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C CSE1P33307 960 aa3.07□□□□□ -1.92
XRN1YGL173C STV1P37296 890 aa3.07□□□□□ -1.92
XRN1YGL173C ICS2P38284 255 aa3.07□□□□□ -1.92
XRN1YGL173C IMD2P38697 523 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C DDI1P40087 428 aa3.07□□□□□ -1.92
XRN1YGL173C RSM25P40496 264 aa3.07□□□□□ -1.92
XRN1YGL173C RPS10BP46784 105 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C MIC26P50087 233 aa3.07□□□□□ -1.92
XRN1YGL173C CTF19Q02732 369 aa3.07□□□□□ -1.92
XRN1YGL173C SRL2Q12020 392 aa3.07□□□□□ -1.92
XRN1YGL173C MLH3Q12083 715 aa3.07□□□□□ -1.92
XRN1YGL173C FLO1P32768 1537 aa3.07□□□□□ -1.92
XRN1YGL173C YUR1P26725 428 aa3.07□□□□□ -1.92
XRN1YGL173C COT1P32798 439 aa3.07□□□□□ -1.92
XRN1YGL173C PRX1P34227 261 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C DOA1P36037 715 aa3.07□□□□□ -1.92
XRN1YGL173C HIS2P38635 335 aa3.07□□□□□ -1.92
XRN1YGL173C PLB1P39105 664 aa3.07□□□□□ -1.92
XRN1YGL173C AIM20P40451 204 aa3.07□□□□□ -1.92
XRN1YGL173C SGN1P40561 250 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
XRN1YGL173C YIR014WP40570 242 aa3.07□□□□□ -1.92
XRN1YGL173C GTS1P40956 396 aa3.07□□□□□ -1.92
XRN1YGL173C YFR018CP43599 363 aa3.07□□□□□ -1.92
XRN1YGL173C ALG11P53954 548 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C YPL034WQ03083 165 aa3.07□□□□□ -1.92
XRN1YGL173C ECI1Q05871 280 aa3.07□□□□□ -1.92
XRN1YGL173C WHI4Q07655 649 aaKnown RBP3.07□□□□□ -1.92
XRN1YGL173C PET111P08468 800 aa3.06□□□□□ -1.92
XRN1YGL173C POL30P15873 258 aaKnown RBP3.06□□□□□ -1.92
XRN1YGL173C ECM8P38246 354 aa3.06□□□□□ -1.92
XRN1YGL173C SHQ1P40486 507 aaPredicted RBP3.06□□□□□ -1.92
XRN1YGL173C MUP1P50276 574 aa3.06□□□□□ -1.92
XRN1YGL173C CAF130P53280 1122 aaPredicted RBP3.06□□□□□ -1.92
XRN1YGL173C PXR1P53335 271 aaPredicted RBP3.06□□□□□ -1.92
XRN1YGL173C YNR048WP53740 393 aa3.06□□□□□ -1.92
XRN1YGL173C MRPL22P53881 309 aa3.06□□□□□ -1.92
XRN1YGL173C ENT5Q03769 411 aaKnown RBP3.06□□□□□ -1.92
XRN1YGL173C ARP10Q04549 284 aa3.06□□□□□ -1.92
XRN1YGL173C YLL007CQ07799 665 aa3.06□□□□□ -1.92
XRN1YGL173C TEN1Q07921 160 aa3.06□□□□□ -1.92
XRN1YGL173C YLR108CQ12259 485 aa3.06□□□□□ -1.92
XRN1YGL173C SME1Q12330 94 aaPredicted RBP3.06□□□□□ -1.92
XRN1YGL173C APC2Q12440 853 aa3.06□□□□□ -1.92
XRN1YGL173C PRM4Q12498 284 aa3.06□□□□□ -1.92
XRN1YGL173C RGS2Q99188 309 aa3.06□□□□□ -1.92
XRN1YGL173C TPK2P06245 380 aa3.06□□□□□ -1.92
XRN1YGL173C ECT1P33412 323 aa3.06□□□□□ -1.92
XRN1YGL173C MRPL10P36520 322 aa3.06□□□□□ -1.92
XRN1YGL173C QDR3P38227 689 aa3.06□□□□□ -1.92
XRN1YGL173C GPI16P38875 610 aa3.06□□□□□ -1.92
XRN1YGL173C PMT4P46971 762 aa3.06□□□□□ -1.92
XRN1YGL173C YDR109CQ04585 715 aa3.06□□□□□ -1.92
XRN1YGL173C YDL114WQ07530 308 aa3.06□□□□□ -1.92
XRN1YGL173C VMA6P32366 345 aaKnown RBP3.06□□□□□ -1.92
XRN1YGL173C SSO1P32867 290 aa3.06□□□□□ -1.92
XRN1YGL173C SKG6P32900 734 aaPredicted RBP3.06□□□□□ -1.92
XRN1YGL173C FRT2P39734 528 aa3.06□□□□□ -1.92
XRN1YGL173C PCL6P40038 420 aa3.06□□□□□ -1.92
XRN1YGL173C LYS12P40495 371 aaKnown RBP3.06□□□□□ -1.92
XRN1YGL173C MOG1P47123 218 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms