RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C PRB1P09232 635 aa2.02□□□□□ -2.09
SMB1YER029C FUN26P31381 517 aa2.02□□□□□ -2.09
SMB1YER029C HSP104P31539 908 aaKnown RBP2.02□□□□□ -2.09
SMB1YER029C IES6P32617 166 aa2.02□□□□□ -2.09
SMB1YER029C MRPL27P36526 146 aaPredicted RBP2.02□□□□□ -2.09
SMB1YER029C GPX2P38143 162 aa2.02□□□□□ -2.09
SMB1YER029C FAD1P38913 306 aa2.02□□□□□ -2.09
SMB1YER029C TIM17P39515 158 aa2.02□□□□□ -2.09
SMB1YER029C HAC1P41546 238 aa2.02□□□□□ -2.09
SMB1YER029C KEG1P43614 200 aa2.02□□□□□ -2.09
SMB1YER029C YPS5P53057 165 aa2.02□□□□□ -2.09
SMB1YER029C CLD1P53264 445 aa2.02□□□□□ -2.09
SMB1YER029C RNY1Q02933 434 aaKnown RBP2.02□□□□□ -2.09
SMB1YER029C PRP3Q03338 469 aaPredicted RBP2.02□□□□□ -2.09
SMB1YER029C VHS1Q03785 461 aa2.02□□□□□ -2.09
SMB1YER029C PRM6Q04705 352 aa2.02□□□□□ -2.09
SMB1YER029C PIN3Q06449 215 aa2.02□□□□□ -2.09
SMB1YER029C YDL114WQ07530 308 aa2.02□□□□□ -2.09
SMB1YER029C NOP6Q07623 225 aaKnown RBP2.02□□□□□ -2.09
SMB1YER029C LOT6Q07923 191 aa2.02□□□□□ -2.09
SMB1YER029C ADH1P00330 348 aaKnown RBP2.01□□□□□ -2.09
SMB1YER029C CDC21P06785 304 aa2.01□□□□□ -2.09
SMB1YER029C ATP1P07251 545 aaKnown RBP2.01□□□□□ -2.09
SMB1YER029C CBP6P07253 162 aaPredicted RBP2.01□□□□□ -2.09
SMB1YER029C MDH1P17505 334 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
SMB1YER029C RIM1P32445 135 aaKnown RBP2.01□□□□□ -2.09
SMB1YER029C MRPS9P38120 278 aa2.01□□□□□ -2.09
SMB1YER029C QDR3P38227 689 aa2.01□□□□□ -2.09
SMB1YER029C MAM33P40513 266 aa2.01□□□□□ -2.09
SMB1YER029C RRP46P53256 223 aaPredicted RBP2.01□□□□□ -2.09
SMB1YER029C YGR111WP53265 400 aa2.01□□□□□ -2.09
SMB1YER029C YHC1Q05900 231 aaKnown RBP2.01□□□□□ -2.09
SMB1YER029C YPR091CQ06833 770 aa2.01□□□□□ -2.09
SMB1YER029C NSE1Q07913 336 aa2.01□□□□□ -2.09
SMB1YER029C AEP3Q12089 606 aa2.01□□□□□ -2.09
SMB1YER029C MCT1Q12283 360 aa2.01□□□□□ -2.09
SMB1YER029C OPI3P05375 206 aa2□□□□□ -2.09
SMB1YER029C RPL12AP0CX53 165 aaKnown RBP2□□□□□ -2.09
SMB1YER029C RPL12BP0CX54 165 aa2□□□□□ -2.09
SMB1YER029C ZRC1P20107 442 aa2□□□□□ -2.09
SMB1YER029C NRP1P32770 719 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
SMB1YER029C LTV1P34078 463 aa2□□□□□ -2.09
SMB1YER029C URC2Q04411 772 aa2□□□□□ -2.09
SMB1YER029C NDL1Q06568 189 aa2□□□□□ -2.09
SMB1YER029C YDL199CQ12407 687 aa2□□□□□ -2.09
SMB1YER029C CHA1P25379 360 aaKnown RBP1.99□□□□□ -2.09
SMB1YER029C SKT5P34226 696 aa1.99□□□□□ -2.09
SMB1YER029C MPE1P35728 441 aaKnown RBP1.99□□□□□ -2.09
SMB1YER029C MCR1P36060 302 aaKnown RBP1.99□□□□□ -2.09
SMB1YER029C PFS1P38872 237 aa1.99□□□□□ -2.09
SMB1YER029C HEM14P40012 539 aa1.99□□□□□ -2.09
SMB1YER029C VHT1P53241 593 aa1.99□□□□□ -2.09
SMB1YER029C ECM7Q06200 448 aa1.99□□□□□ -2.09
SMB1YER029C IES4Q08561 116 aa1.99□□□□□ -2.09
SMB1YER029C YPQ1Q12010 308 aa1.99□□□□□ -2.09
SMB1YER029C FCY22Q12119 530 aa1.99□□□□□ -2.09
SMB1YER029C DPH2P32461 534 aa1.98□□□□□ -2.09
SMB1YER029C COX13P32799 129 aa1.98□□□□□ -2.09
SMB1YER029C SPO23P33757 523 aa1.98□□□□□ -2.09
SMB1YER029C TIR2P33890 251 aa1.98□□□□□ -2.09
SMB1YER029C GPI18P38211 433 aa1.98□□□□□ -2.09
SMB1YER029C IGD1P43598 195 aa1.98□□□□□ -2.09
SMB1YER029C SEH1P53011 349 aaKnown RBP1.98□□□□□ -2.09
SMB1YER029C VAC7P53950 1165 aa1.98□□□□□ -2.09
SMB1YER029C TPS1Q00764 495 aaKnown RBP1.98□□□□□ -2.09
SMB1YER029C SPR6Q01684 191 aa1.98□□□□□ -2.09
SMB1YER029C ECM11Q04110 302 aa1.98□□□□□ -2.09
SMB1YER029C ASA1Q06822 443 aa1.98□□□□□ -2.09
SMB1YER029C GPM3Q12326 303 aa1.98□□□□□ -2.09
SMB1YER029C YOP1Q12402 180 aa1.98□□□□□ -2.09
SMB1YER029C ISA2Q12425 185 aa1.98□□□□□ -2.09
SMB1YER029C TPK3P05986 398 aa1.97□□□□□ -2.09
SMB1YER029C PHO91P27514 894 aa1.97□□□□□ -2.09
SMB1YER029C DEP1P31385 405 aa1.97□□□□□ -2.09
SMB1YER029C YSC83P32792 385 aa1.97□□□□□ -2.09
SMB1YER029C RAD5P32849 1169 aaPredicted RBP1.97□□□□□ -2.09
SMB1YER029C ECT1P33412 323 aa1.97□□□□□ -2.09
SMB1YER029C YNL208WP40159 199 aaKnown RBP1.97□□□□□ -2.09
SMB1YER029C YGL262WP53054 175 aa1.97□□□□□ -2.09
SMB1YER029C ROG1P53118 685 aa1.97□□□□□ -2.09
SMB1YER029C MKC7P53379 596 aa1.97□□□□□ -2.09
SMB1YER029C MEH1Q02205 184 aa1.97□□□□□ -2.09
SMB1YER029C ENT5Q03769 411 aaKnown RBP1.97□□□□□ -2.09
SMB1YER029C RNA1P11745 407 aaKnown RBP1.96□□□□□ -2.1
SMB1YER029C MSP1P28737 362 aa1.96□□□□□ -2.1
SMB1YER029C DBF4P32325 704 aa1.96□□□□□ -2.1
SMB1YER029C GEP4P38812 185 aa1.96□□□□□ -2.1
SMB1YER029C CHL4P38907 458 aa1.96□□□□□ -2.1
SMB1YER029C MLH1P38920 769 aa1.96□□□□□ -2.1
SMB1YER029C ATM1P40416 690 aa1.96□□□□□ -2.1
SMB1YER029C PAC11P40960 533 aa1.96□□□□□ -2.1
SMB1YER029C PIB2P53191 635 aa1.96□□□□□ -2.1
SMB1YER029C YDR541CQ03049 344 aa1.96□□□□□ -2.1
SMB1YER029C DCI1Q08558 271 aa1.96□□□□□ -2.1
SMB1YER029C YOR376WQ08900 122 aa1.96□□□□□ -2.1
SMB1YER029C RAX2Q12465 1220 aa1.96□□□□□ -2.1
SMB1YER029C PCL9Q12477 304 aa1.96□□□□□ -2.1
SMB1YER029C ARF1P11076 181 aaKnown RBP1.95□□□□□ -2.1
SMB1YER029C CMK2P22517 447 aa1.95□□□□□ -2.1
SMB1YER029C SLM5P25345 492 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms