RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	NOP58	Q12499	511 aa	Known RBP	5.89	□□□□□ -1.47
CDC1	YDR182W	TAD3	Q9URQ3	322 aa		5.89	□□□□□ -1.47
CDC1	YDR182W	FUR4	P05316	633 aa	Known RBP	5.88	□□□□□ -1.47
CDC1	YDR182W	MRP13	P12686	339 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	MRPL33	P20084	86 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	GFD2	P25370	566 aa	Known RBP	5.88	□□□□□ -1.47
CDC1	YDR182W	SCO2	P38072	301 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	YHR177W	P38867	453 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	RIX1	P38883	763 aa	Predicted RBP	5.88	□□□□□ -1.47
CDC1	YDR182W	VPS41	P38959	992 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	BOL3	P39724	118 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	BPL1	P48445	690 aa	Predicted RBP	5.88	□□□□□ -1.47
CDC1	YDR182W	UBC9	P50623	157 aa	Predicted RBP	5.88	□□□□□ -1.47
CDC1	YDR182W	YSA1	Q01976	231 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	PFA5	Q03289	374 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	YLR446W	Q06204	433 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	YOL131W	Q08270	108 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	COX17	Q12287	69 aa		5.88	□□□□□ -1.47
CDC1	YDR182W	YFR010W-A	P0C5N0	62 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	BAR1	P12630	587 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	NCP1	P16603	691 aa	Known RBP	5.87	□□□□□ -1.47
CDC1	YDR182W	ATG15	P25641	520 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	ERG9	P29704	444 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	KRE6	P32486	720 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	NUP2	P32499	720 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	MRPL17	P36528	281 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
CDC1	YDR182W	DSS1	P39112	969 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	GAB1	P41733	394 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	PGU1	P47180	361 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	PAC10	P48363	199 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	PAL1	Q05518	499 aa	Known RBP	5.87	□□□□□ -1.47
CDC1	YDR182W	YLR413W	Q06689	675 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	YOS9	Q99220	542 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	YPT6	Q99260	215 aa		5.87	□□□□□ -1.47
CDC1	YDR182W	ADE5,7	P07244	802 aa	Known RBP	5.86	□□□□□ -1.47
CDC1	YDR182W	PHO81	P17442	1178 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	KGD1	P20967	1014 aa	Known RBP	5.86	□□□□□ -1.47
CDC1	YDR182W	CCA1	P21269	546 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	NGG1	P32494	702 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	ANS1	P38832	159 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	RGI1	P40043	161 aa	Predicted RBP	5.86	□□□□□ -1.47
CDC1	YDR182W	SOK1	P40317	901 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	KEL2	P50090	882 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	IMA1	P53051	589 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	YGR079W	P53249	370 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	CUZ1	P53899	274 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	LGE1	Q02796	332 aa	Known RBP	5.86	□□□□□ -1.47
CDC1	YDR182W	YDR541C	Q03049	344 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	SHE9	Q04172	456 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	RRG7	Q08774	242 aa	Predicted RBP	5.86	□□□□□ -1.47
CDC1	YDR182W	RPN6	Q12377	434 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	MDM12	Q92328	271 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	MTR10	Q99189	972 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	Q0144	Q9ZZW2	109 aa		5.86	□□□□□ -1.47
CDC1	YDR182W	ARG3	P05150	338 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	HTS1	P07263	546 aa	Known RBP	5.85	□□□□□ -1.47
CDC1	YDR182W	ERD1	P16151	362 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	VMA3	P25515	160 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	ATS1	P31386	333 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	SNU114	P36048	1008 aa	Known RBP	5.85	□□□□□ -1.47
CDC1	YDR182W	TUL1	P36096	758 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	MRPL16	P38064	232 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	APD1	P38281	316 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	TOK1	P40310	691 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	QDR2	P40474	542 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	RNH70	P53331	553 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	RPM2	Q02773	1202 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	YMR265C	Q03508	461 aa	Known RBP	5.85	□□□□□ -1.47
CDC1	YDR182W	GAS2	Q06135	555 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	LSO1	Q3E827	93 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	FLO9	P39712	1322 aa		5.85	□□□□□ -1.47
CDC1	YDR182W	GPH1	P06738	902 aa	Known RBP	5.84	□□□□□ -1.47
CDC1	YDR182W	RAP1	P11938	827 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	CTA1	P15202	515 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	DIT1	P21623	536 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	MAK32	P23060	363 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	RAD51	P25454	400 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	YCL049C	P25577	312 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	MRE11	P32829	692 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	SIP2	P34164	415 aa	Known RBP	5.84	□□□□□ -1.47
CDC1	YDR182W	TPO5	P36029	618 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	FAA2	P39518	744 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	YNL208W	P40159	199 aa	Known RBP	5.84	□□□□□ -1.47
CDC1	YDR182W	YJL068C	P40363	299 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	YIL067C	P40514	678 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	SWP1	Q02795	286 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	NCE101	Q02820	53 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	PLM2	Q04383	521 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	NAT4	Q04751	285 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	DCR2	Q05924	578 aa		5.84	□□□□□ -1.47
CDC1	YDR182W	TY4B-P	A0A0B7P3V8	1104 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	FLP1	P03870	423 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	ZWF1	P11412	505 aa	Known RBP	5.83	□□□□□ -1.48
CDC1	YDR182W	HMG1	P12683	1054 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	STE12	P13574	688 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	CWH43	P25618	953 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	PHO91	P27514	894 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	RAD14	P28519	371 aa		5.83	□□□□□ -1.48
CDC1	YDR182W	BIT61	P47041	543 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms