RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC2	YDR180W	IST3	P40565	148 aa	Predicted RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	IDS2	P46958	469 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	YJR149W	P47177	404 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	RPS7B	P48164	190 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	BUD32	P53323	261 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	SAM50	P53969	484 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	PEX25	Q02969	394 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	TRS31	Q03337	283 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	CRF1	Q04930	467 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	RSF1	Q05043	376 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	GAS2	Q06135	555 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	KAP95	Q06142	861 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	YLR173W	Q06247	608 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	YLR413W	Q06689	675 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	GPM2	Q12008	311 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	THP3	Q12049	470 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	YPL245W	Q12179	454 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	EMP46	Q12396	444 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	MF(ALPHA)1	P01149	165 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	CBP2	P03874	630 aa	Predicted RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	GAL80	P04387	435 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	RPC40	P07703	335 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	SPE1	P08432	466 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	NHP6B	P11633	99 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	GCN3	P14741	305 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	PET9	P18239	318 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	RNR1	P21524	888 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	MEK1	P24719	497 aa	Predicted RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	RFA2	P26754	273 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.99	□□□□□ -2.25	not detected
SCC2	YDR180W	MSN4	P33749	630 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	SOF1	P33750	489 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	YKL162C	P36052	402 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	DUG2	P38149	878 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	SIP3	P38717	1229 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	FSH1	P38777	243 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	SMC2	P38989	1170 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	FLC2	P39719	783 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	MPM1	P40364	252 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	YIR035C	P40579	254 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	SKP2	P42843	763 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	YDL183C	P48569	320 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	UBP8	P50102	471 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	ALT2	P52892	507 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	MPS2	P53159	387 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	MTL1	P53214	551 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	SLM2	P53955	656 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	ADE16	P54113	591 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	YPL108W	Q02872	168 aa	Predicted RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	TSR1	Q07381	788 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	TPO1	Q07824	586 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	PML1	Q07930	204 aa	Predicted RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	REX3	Q12090	404 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	AFI1	Q99222	893 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	YPR170W-B	P0C5R9	85 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	ASP3-2	P0CX77	362 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	ASP3-3	P0CX78	362 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	ASP3-4	P0CX79	362 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	ASP3-1	P0CZ17	362 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	SEC12	P11655	471 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	CAF20	P12962	161 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	SEC63	P14906	663 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	CDC43	P18898	376 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	VMA16	P23968	213 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	PUT3	P25502	979 aa	Predicted RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	KRR1	P25586	316 aa	Predicted RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	ADK2	P26364	225 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	RSM22	P36056	628 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	RCK1	P38622	512 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	SPC97	P38863	823 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	RBG1	P39729	369 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	FMP52	P40008	231 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	GET2	P40056	285 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	ALG8	P40351	577 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	LAS21	P40367	830 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	SDP1	P40479	209 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	HXT14	P42833	540 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	YFL040W	P43562	540 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	AGX1	P43567	385 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	DPB11	P47027	764 aa	Predicted RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	DIE2	P50076	525 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	GLO1	P50107	326 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	YML6	P51998	286 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	DIA3	P52290	468 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	NUP84	P52891	726 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	NBP1	P52919	319 aa	Predicted RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	RMR1	P53060	241 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	YGR151C	P53287	111 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	NSG2	P53898	299 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	YNL146W	P53906	100 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	TRM82	Q03774	444 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	MSS11	Q03825	758 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	DCR2	Q05924	578 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	MRI1	Q06489	411 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	RRT8	Q08219	342 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	TGL5	Q12043	749 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	UPC2	Q12151	913 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	RGT2	Q12300	763 aa		0.99	□□□□□ -2.25
SCC2	YDR180W	HRP1	Q99383	534 aa	Known RBP	0.99	□□□□□ -2.25
SCC2	YDR180W	STE3	P06783	470 aa		0.98	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms