RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	AI4	P03878	556 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	ERR1	P0CX10	437 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	ERR2	P0CX11	437 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	REV1	P12689	985 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	PRP2	P20095	876 aa	Predicted RBP	4.99	□□□□□ -1.61
DBF4	YDR052C	YCL002C	P25565	263 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	AEP1	P32493	518 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	TCA17	P32613	152 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
DBF4	YDR052C	LIP5	P32875	414 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	MRPL36	P36531	177 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	AHP1	P38013	176 aa	Known RBP	4.99	□□□□□ -1.61
DBF4	YDR052C	SRO77	P38163	1010 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	BIT2	P38346	545 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	PEX28	P38848	579 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	RBG1	P39729	369 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	ERR3	P42222	437 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	AAD10	P47182	288 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	YML6	P51998	286 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	YGR168C	P53293	376 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	VPS9	P54787	451 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	PST2	Q12335	198 aa	Known RBP	4.99	□□□□□ -1.61
DBF4	YDR052C	YPR145C-A	Q2V2P0	78 aa		4.99	□□□□□ -1.61
DBF4	YDR052C	MYO1	P08964	1928 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	RPL9A	P05738	191 aa	Known RBP	4.98	□□□□□ -1.61
DBF4	YDR052C	YEL076C-A	P0CX16	216 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	YLR464W	P0CX17	216 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	FUN14	P18411	198 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	DCC1	P25559	380 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	SNC1	P31109	117 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	ACB1	P31787	87 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
DBF4	YDR052C	CTF13	P35203	478 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	NPR2	P39923	615 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	YEL076C	P39971	216 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	UTP7	P40055	554 aa	Known RBP	4.98	□□□□□ -1.61
DBF4	YDR052C	YMR144W	P40214	342 aa	Known RBP	4.98	□□□□□ -1.61
DBF4	YDR052C	PTR3	P43606	678 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	RPA34	P47006	233 aa	Predicted RBP	4.98	□□□□□ -1.61
DBF4	YDR052C	AIM22	P47051	409 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	RPL9B	P51401	191 aa	Known RBP	4.98	□□□□□ -1.61
DBF4	YDR052C	LSM7	P53905	115 aa	Known RBP	4.98	□□□□□ -1.61
DBF4	YDR052C	RPA49	Q01080	415 aa	Predicted RBP	4.98	□□□□□ -1.61
DBF4	YDR052C	TDA1	Q03533	586 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	ASR1	Q06834	288 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	IZH3	Q07959	543 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	RAD28	Q12021	506 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	PCD1	Q12524	340 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	FLO11	P08640	1367 aa		4.98	□□□□□ -1.61
DBF4	YDR052C	TIM9	O74700	87 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	CYC1	P00044	109 aa	Predicted RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	SPS2	P08459	502 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	RPL8A	P17076	256 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	PRE1	P22141	198 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	NAR1	P23503	491 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	CSM1	P25651	190 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	RPL8B	P29453	256 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	PHO11	P35842	467 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	TOS1	P38288	455 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	PHO12	P38693	467 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	MND2	P40577	368 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	YGR042W	P53227	271 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	SLX9	P53251	210 aa	Predicted RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	YGR273C	P53329	174 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	RPS15	Q01855	142 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	TRS31	Q03337	283 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	PPN1	Q04119	674 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	PEX12	Q04370	399 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	PRM6	Q04705	352 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	TVP18	Q04767	167 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	YDR222W	Q04925	415 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	HOF1	Q05080	669 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	SDO1	Q07953	250 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	RRG7	Q08774	242 aa	Predicted RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	KEL3	Q08979	651 aa	Predicted RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	VAM3	Q12241	283 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	YDL199C	Q12407	687 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	VMA9	Q3E7B6	73 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	RGS2	Q99188	309 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	MAK31	P23059	88 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	RPI1	P23250	407 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	PRE7	P23724	241 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	GRR1	P24814	1151 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	PUP1	P25043	261 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	EMC1	P25574	760 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	IMG1	P25626	169 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	COQ3	P27680	312 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
DBF4	YDR052C	GCD11	P32481	527 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	CAT2	P32796	670 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	NGR1	P32831	672 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	WBP1	P33767	430 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	NOP4	P37838	685 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	MBA1	P38300	278 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	ARN1	P38731	627 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	MNL1	P38888	796 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	FAD1	P38913	306 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	TMA108	P40462	946 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	GLR1	P41921	483 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	SSY5	P47002	699 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms