RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C RAD5P32849 1169 aaPredicted RBP3.62□□□□□ -1.83
RRI1YDL216C YHK8P38776 514 aa3.62□□□□□ -1.83
RRI1YDL216C MIG3P39943 394 aa3.62□□□□□ -1.83
RRI1YDL216C ATM1P40416 690 aa3.62□□□□□ -1.83
RRI1YDL216C DFG10P40526 253 aa3.62□□□□□ -1.83
RRI1YDL216C RSC1P53236 928 aa3.62□□□□□ -1.83
RRI1YDL216C CLD1P53264 445 aa3.62□□□□□ -1.83
RRI1YDL216C RNH203Q12338 110 aa3.62□□□□□ -1.83
RRI1YDL216C AHC1Q12433 566 aa3.62□□□□□ -1.83
RRI1YDL216C RPL1AP0CX43 217 aaKnown RBP3.61□□□□□ -1.83
RRI1YDL216C RPL1BP0CX44 217 aaKnown RBP3.61□□□□□ -1.83
RRI1YDL216C RPL12AP0CX53 165 aaKnown RBP3.61□□□□□ -1.83
RRI1YDL216C RPL12BP0CX54 165 aa3.61□□□□□ -1.83
RRI1YDL216C ARF1P11076 181 aaKnown RBP3.61□□□□□ -1.83
RRI1YDL216C NAT1P12945 854 aaKnown RBP3.61□□□□□ -1.83
RRI1YDL216C PCL1P24867 279 aa3.61□□□□□ -1.83
RRI1YDL216C DOA1P36037 715 aa3.61□□□□□ -1.83
RRI1YDL216C LCB2P40970 561 aa3.61□□□□□ -1.83
RRI1YDL216C COS1P53822 381 aa3.61□□□□□ -1.83
RRI1YDL216C TDA1Q03533 586 aa3.61□□□□□ -1.83
RRI1YDL216C TSA2Q04120 196 aa3.61□□□□□ -1.83
RRI1YDL216C SSC1P0CS90 654 aaKnown RBP3.6□□□□□ -1.83
RRI1YDL216C HSP26P15992 214 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
RRI1YDL216C YSC83P32792 385 aa3.6□□□□□ -1.83
RRI1YDL216C SPT10P35208 640 aa3.6□□□□□ -1.83
RRI1YDL216C MCR1P36060 302 aaKnown RBP3.6□□□□□ -1.83
RRI1YDL216C CRH1P53301 507 aa3.6□□□□□ -1.83
RRI1YDL216C URC2Q04411 772 aa3.6□□□□□ -1.83
RRI1YDL216C YOP1Q12402 180 aa3.6□□□□□ -1.83
RRI1YDL216C YCR024C-BQ3E7Z8 88 aa3.6□□□□□ -1.83
RRI1YDL216C TPK3P05986 398 aa3.59□□□□□ -1.83
RRI1YDL216C UTH1P36135 365 aa3.59□□□□□ -1.83
RRI1YDL216C OXA1P39952 402 aa3.59□□□□□ -1.83
RRI1YDL216C EGT2P42835 1041 aa3.59□□□□□ -1.83
RRI1YDL216C ATG18P43601 500 aa3.59□□□□□ -1.83
RRI1YDL216C BNS1P50084 137 aa3.59□□□□□ -1.83
RRI1YDL216C RTT102P53330 157 aa3.59□□□□□ -1.83
RRI1YDL216C TRM112P53738 135 aaPredicted RBP3.59□□□□□ -1.83
RRI1YDL216C ECM7Q06200 448 aa3.59□□□□□ -1.83
RRI1YDL216C YDL114WQ07530 308 aa3.59□□□□□ -1.83
RRI1YDL216C AAD15Q08361 143 aa3.59□□□□□ -1.83
RRI1YDL216C OPI3P05375 206 aa3.58□□□□□ -1.84
RRI1YDL216C MNE1P24720 663 aa3.58□□□□□ -1.84
RRI1YDL216C ANR2P36090 516 aaPredicted RBP3.58□□□□□ -1.84
RRI1YDL216C KAP104P38217 918 aaKnown RBP3.58□□□□□ -1.84
RRI1YDL216C PTI1P39927 425 aaPredicted RBP3.58□□□□□ -1.84
RRI1YDL216C GDI1P39958 451 aaKnown RBP3.58□□□□□ -1.84
RRI1YDL216C EFM4P40516 257 aa3.58□□□□□ -1.84
RRI1YDL216C ASN2P49090 572 aaKnown RBP3.58□□□□□ -1.84
RRI1YDL216C LIP2Q06005 328 aa3.58□□□□□ -1.84
RRI1YDL216C PAR32Q12515 295 aaKnown RBP3.58□□□□□ -1.84
RRI1YDL216C SRN2Q99176 213 aa3.58□□□□□ -1.84
RRI1YDL216C MDL1P33310 695 aa3.57□□□□□ -1.84
RRI1YDL216C YNL208WP40159 199 aaKnown RBP3.57□□□□□ -1.84
RRI1YDL216C PMT5P52867 743 aa3.57□□□□□ -1.84
RRI1YDL216C MEH1Q02205 184 aa3.57□□□□□ -1.84
RRI1YDL216C YET2Q04210 160 aa3.57□□□□□ -1.84
RRI1YDL216C YPR091CQ06833 770 aa3.57□□□□□ -1.84
RRI1YDL216C NAG1Q8TGN9 163 aa3.57□□□□□ -1.84
RRI1YDL216C GPX2P38143 162 aa3.56□□□□□ -1.84
RRI1YDL216C MRP21P38175 177 aa3.56□□□□□ -1.84
RRI1YDL216C PFF1P38244 976 aa3.56□□□□□ -1.84
RRI1YDL216C GEP4P38812 185 aa3.56□□□□□ -1.84
RRI1YDL216C BAT1P38891 393 aaKnown RBP3.56□□□□□ -1.84
RRI1YDL216C AIP1P46680 615 aaKnown RBP3.56□□□□□ -1.84
RRI1YDL216C TOS2P50078 622 aa3.56□□□□□ -1.84
RRI1YDL216C RRN9P53437 365 aa3.56□□□□□ -1.84
RRI1YDL216C ASA1Q06822 443 aa3.56□□□□□ -1.84
RRI1YDL216C PCL9Q12477 304 aa3.56□□□□□ -1.84
RRI1YDL216C CDC50P25656 391 aa3.55□□□□□ -1.84
RRI1YDL216C FUN26P31381 517 aa3.55□□□□□ -1.84
RRI1YDL216C OM14P38325 134 aa3.55□□□□□ -1.84
RRI1YDL216C MNL1P38888 796 aa3.55□□□□□ -1.84
RRI1YDL216C MLH1P38920 769 aa3.55□□□□□ -1.84
RRI1YDL216C YER186CP40101 306 aa3.55□□□□□ -1.84
RRI1YDL216C IPK1Q06667 281 aa3.55□□□□□ -1.84
RRI1YDL216C LDS2Q08218 356 aa3.55□□□□□ -1.84
RRI1YDL216C FCY22Q12119 530 aa3.55□□□□□ -1.84
RRI1YDL216C MEX67Q99257 599 aaKnown RBP3.55□□□□□ -1.84
RRI1YDL216C TOA2P32774 122 aa3.54□□□□□ -1.84
RRI1YDL216C TIR2P33890 251 aa3.54□□□□□ -1.84
RRI1YDL216C JEM1P40358 645 aa3.54□□□□□ -1.84
RRI1YDL216C MLC1P53141 149 aa3.54□□□□□ -1.84
RRI1YDL216C ERO1Q03103 563 aa3.54□□□□□ -1.84
RRI1YDL216C NOP6Q07623 225 aaKnown RBP3.54□□□□□ -1.84
RRI1YDL216C MFG1Q07684 458 aa3.54□□□□□ -1.84
RRI1YDL216C RNA1P11745 407 aaKnown RBP3.53□□□□□ -1.84
RRI1YDL216C IES6P32617 166 aa3.53□□□□□ -1.84
RRI1YDL216C MID2P36027 376 aa3.53□□□□□ -1.84
RRI1YDL216C ECM8P38246 354 aa3.53□□□□□ -1.84
RRI1YDL216C GDT1P38301 280 aaPredicted RBP3.53□□□□□ -1.84
RRI1YDL216C SEC28P40509 296 aaKnown RBP3.53□□□□□ -1.84
RRI1YDL216C SKI8Q02793 397 aaPredicted RBP3.53□□□□□ -1.84
RRI1YDL216C PUP2P32379 260 aa3.52□□□□□ -1.85
RRI1YDL216C YDL199CQ12407 687 aa3.52□□□□□ -1.85
RRI1YDL216C COX4P04037 155 aa3.51□□□□□ -1.85
RRI1YDL216C RPL6BP05739 176 aaKnown RBP3.51□□□□□ -1.85
RRI1YDL216C RRP7P25368 297 aaPredicted RBP3.51□□□□□ -1.85
RRI1YDL216C DEP1P31385 405 aa3.51□□□□□ -1.85
RRI1YDL216C SPO23P33757 523 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms