RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C RQC1Q05468 723 aaKnown RBP4.34□□□□□ -1.72
CDC48YDL126C YLR455WQ06188 304 aa4.34□□□□□ -1.72
CDC48YDL126C RCN2Q12044 265 aa4.34□□□□□ -1.72
CDC48YDL126C MED2Q12124 431 aa4.34□□□□□ -1.72
CDC48YDL126C DFG16Q99234 619 aa4.34□□□□□ -1.72
CDC48YDL126C BI2P03873 423 aa4.33□□□□□ -1.72
CDC48YDL126C SRV2P17555 526 aaKnown RBP4.33□□□□□ -1.72
CDC48YDL126C PRR1P28708 518 aa4.33□□□□□ -1.72
CDC48YDL126C SYN8P31377 255 aa4.33□□□□□ -1.72
CDC48YDL126C NTR2P36118 322 aaPredicted RBP4.33□□□□□ -1.72
CDC48YDL126C YMR262WP38430 313 aa4.33□□□□□ -1.72
CDC48YDL126C STB5P38699 743 aa4.33□□□□□ -1.72
CDC48YDL126C YHI9P38765 294 aa4.33□□□□□ -1.72
CDC48YDL126C FSH1P38777 243 aaKnown RBP4.33□□□□□ -1.72
CDC48YDL126C FMO1P38866 432 aa4.33□□□□□ -1.72
CDC48YDL126C GIP4P39732 760 aa4.33□□□□□ -1.72
CDC48YDL126C DSE1P40077 573 aa4.33□□□□□ -1.72
CDC48YDL126C NMD5P46970 1048 aa4.33□□□□□ -1.72
CDC48YDL126C ZAP1P47043 880 aa4.33□□□□□ -1.72
CDC48YDL126C PRP24P49960 444 aaKnown RBP4.33□□□□□ -1.72
CDC48YDL126C RMR1P53060 241 aa4.33□□□□□ -1.72
CDC48YDL126C NMA2P53204 395 aa4.33□□□□□ -1.72
CDC48YDL126C ALG11P53954 548 aaKnown RBP4.33□□□□□ -1.72
CDC48YDL126C RLI1Q03195 608 aaKnown RBP4.33□□□□□ -1.72
CDC48YDL126C ROT1Q03691 256 aa4.33□□□□□ -1.72
CDC48YDL126C YFT2Q06676 274 aa4.33□□□□□ -1.72
CDC48YDL126C CTF3Q12748 733 aa4.33□□□□□ -1.72
CDC48YDL126C BI3Q9ZZW7 517 aa4.33□□□□□ -1.72
CDC48YDL126C ARG4P04076 463 aaPredicted RBP4.33□□□□□ -1.72
CDC48YDL126C CDC20P26309 610 aa4.33□□□□□ -1.72
CDC48YDL126C RPS5P26783 225 aaKnown RBP4.33□□□□□ -1.72
CDC48YDL126C CAM1P29547 415 aaKnown RBP4.33□□□□□ -1.72
CDC48YDL126C DCG1P32460 244 aa4.33□□□□□ -1.72
CDC48YDL126C RML2P32611 393 aa4.33□□□□□ -1.72
CDC48YDL126C YMC2P38087 329 aa4.33□□□□□ -1.72
CDC48YDL126C VHC1P38329 1120 aa4.33□□□□□ -1.72
CDC48YDL126C PCA1P38360 1216 aa4.33□□□□□ -1.72
CDC48YDL126C DDI1P40087 428 aa4.33□□□□□ -1.72
CDC48YDL126C YMR134WP40207 237 aa4.33□□□□□ -1.72
CDC48YDL126C PFK26P40433 827 aaKnown RBP4.33□□□□□ -1.72
CDC48YDL126C RIM13Q03792 727 aa4.33□□□□□ -1.72
CDC48YDL126C DDC1Q08949 612 aa4.33□□□□□ -1.72
CDC48YDL126C PRS5Q12265 496 aaKnown RBP4.33□□□□□ -1.72
CDC48YDL126C TRM13Q12383 476 aa4.33□□□□□ -1.72
CDC48YDL126C HXT2P23585 541 aa4.32□□□□□ -1.72
CDC48YDL126C CYM1P32898 989 aa4.32□□□□□ -1.72
CDC48YDL126C CCT2P39076 527 aaKnown RBP4.32□□□□□ -1.72
CDC48YDL126C AIM2P39721 246 aa4.32□□□□□ -1.72
CDC48YDL126C GTT1P40582 234 aa4.32□□□□□ -1.72
CDC48YDL126C QRI1P43123 477 aaKnown RBP4.32□□□□□ -1.72
CDC48YDL126C COS4P43542 379 aa4.32□□□□□ -1.72
CDC48YDL126C OTU1P43558 301 aa4.32□□□□□ -1.72
CDC48YDL126C COS1P53822 381 aa4.32□□□□□ -1.72
CDC48YDL126C NOP13P53883 403 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
CDC48YDL126C MRPL1Q04599 285 aa4.32□□□□□ -1.72
CDC48YDL126C BUR2Q05949 395 aa4.32□□□□□ -1.72
CDC48YDL126C FRE5Q08908 694 aa4.32□□□□□ -1.72
CDC48YDL126C YDL109CQ12103 647 aa4.32□□□□□ -1.72
CDC48YDL126C RUP1Q12242 671 aa4.32□□□□□ -1.72
CDC48YDL126C ADE4P04046 510 aaKnown RBP4.32□□□□□ -1.72
CDC48YDL126C YGL041W-AP0C5N3 154 aa4.32□□□□□ -1.72
CDC48YDL126C ATR1P13090 542 aa4.32□□□□□ -1.72
CDC48YDL126C SAT4P25333 603 aaKnown RBP4.32□□□□□ -1.72
CDC48YDL126C SLM4P38247 162 aa4.32□□□□□ -1.72
CDC48YDL126C POP4P38336 279 aa4.32□□□□□ -1.72
CDC48YDL126C MSE1P48525 536 aa4.32□□□□□ -1.72
CDC48YDL126C MRK1P50873 501 aa4.32□□□□□ -1.72
CDC48YDL126C GET1P53192 235 aa4.32□□□□□ -1.72
CDC48YDL126C GTF1P53260 183 aaPredicted RBP4.32□□□□□ -1.72
CDC48YDL126C PRM1P53835 661 aa4.32□□□□□ -1.72
CDC48YDL126C MZM1Q03429 123 aaPredicted RBP4.32□□□□□ -1.72
CDC48YDL126C FEX1Q08913 375 aa4.32□□□□□ -1.72
CDC48YDL126C YOL107WQ12239 342 aa4.32□□□□□ -1.72
CDC48YDL126C YOR012WQ12351 137 aa4.32□□□□□ -1.72
CDC48YDL126C Q0010Q9ZZX9 128 aa4.32□□□□□ -1.72
CDC48YDL126C PEP5P12868 1029 aa4.31□□□□□ -1.72
CDC48YDL126C SAG1P20840 650 aa4.31□□□□□ -1.72
CDC48YDL126C VMA16P23968 213 aa4.31□□□□□ -1.72
CDC48YDL126C MEK1P24719 497 aaPredicted RBP4.31□□□□□ -1.72
CDC48YDL126C GAR1P28007 205 aaKnown RBP4.31□□□□□ -1.72
CDC48YDL126C SEC1P30619 724 aaKnown RBP4.31□□□□□ -1.72
CDC48YDL126C LST4P34239 828 aa4.31□□□□□ -1.72
CDC48YDL126C TAF14P35189 244 aa4.31□□□□□ -1.72
CDC48YDL126C TDP1P38319 544 aa4.31□□□□□ -1.72
CDC48YDL126C TAE1P38340 232 aa4.31□□□□□ -1.72
CDC48YDL126C ATG7P38862 630 aa4.31□□□□□ -1.72
CDC48YDL126C SSO2P39926 295 aa4.31□□□□□ -1.72
CDC48YDL126C YER085CP40058 173 aa4.31□□□□□ -1.72
CDC48YDL126C ARG2P40360 574 aa4.31□□□□□ -1.72
CDC48YDL126C HPM1P40481 377 aa4.31□□□□□ -1.72
CDC48YDL126C ERG10P41338 398 aaKnown RBP4.31□□□□□ -1.72
CDC48YDL126C LIA1P47120 325 aaKnown RBP4.31□□□□□ -1.72
CDC48YDL126C DIA3P52290 468 aa4.31□□□□□ -1.72
CDC48YDL126C OGG1P53397 376 aaPredicted RBP4.31□□□□□ -1.72
CDC48YDL126C MUK1Q02866 612 aa4.31□□□□□ -1.72
CDC48YDL126C SNU56Q03782 492 aaKnown RBP4.31□□□□□ -1.72
CDC48YDL126C VTA1Q06263 330 aa4.31□□□□□ -1.72
CDC48YDL126C SLD7Q08457 257 aa4.31□□□□□ -1.72
CDC48YDL126C OSW1Q08692 278 aa4.31□□□□□ -1.72
CDC48YDL126C SUT2Q12286 268 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms