RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W RGC1Q06108 1083 aaKnown RBP2□□□□□ -2.09
UBP1YDL122W NOP6Q07623 225 aaKnown RBP2□□□□□ -2.09
UBP1YDL122W YOL029CQ08187 201 aa2□□□□□ -2.09
UBP1YDL122W THR1P17423 357 aaKnown RBP2□□□□□ -2.09
UBP1YDL122W CPR2P23285 205 aa2□□□□□ -2.09
UBP1YDL122W RBK1P25332 333 aa2□□□□□ -2.09
UBP1YDL122W DCC1P25559 380 aa2□□□□□ -2.09
UBP1YDL122W MXR2P25566 168 aa2□□□□□ -2.09
UBP1YDL122W URA7P28274 579 aaKnown RBP2□□□□□ -2.09
UBP1YDL122W MSS1P32559 526 aaPredicted RBP2□□□□□ -2.09
UBP1YDL122W SMI1P32566 505 aa2□□□□□ -2.09
UBP1YDL122W YPT52P36018 234 aaKnown RBP2□□□□□ -2.09
UBP1YDL122W LAS1P36146 502 aaPredicted RBP2□□□□□ -2.09
UBP1YDL122W YBP1P38315 674 aa2□□□□□ -2.09
UBP1YDL122W SDH8P38345 138 aa2□□□□□ -2.09
UBP1YDL122W RRF1P38771 230 aa2□□□□□ -2.09
UBP1YDL122W YIL152WP40455 235 aa2□□□□□ -2.09
UBP1YDL122W SGN1P40561 250 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
UBP1YDL122W MPS3P47069 682 aa2□□□□□ -2.09
UBP1YDL122W ASN2P49090 572 aaKnown RBP2□□□□□ -2.09
UBP1YDL122W ROY1Q04847 553 aa2□□□□□ -2.09
UBP1YDL122W IZH3Q07959 543 aa2□□□□□ -2.09
UBP1YDL122W TMC1Q08422 150 aaPredicted RBP2□□□□□ -2.09
UBP1YDL122W YOR012WQ12351 137 aa2□□□□□ -2.09
UBP1YDL122W AVL9Q12500 764 aa2□□□□□ -2.09
UBP1YDL122W YBR255C-AQ3E776 120 aa2□□□□□ -2.09
UBP1YDL122W YER175W-AQ8TGU4 54 aa2□□□□□ -2.09
UBP1YDL122W ARD1P07347 238 aaPredicted RBP1.99□□□□□ -2.09
UBP1YDL122W YFR010W-AP0C5N0 62 aa1.99□□□□□ -2.09
UBP1YDL122W MSS116P15424 664 aaKnown RBP1.99□□□□□ -2.09
UBP1YDL122W EST1P17214 699 aaPredicted RBP1.99□□□□□ -2.09
UBP1YDL122W VMA16P23968 213 aa1.99□□□□□ -2.09
UBP1YDL122W PDB1P32473 366 aaKnown RBP1.99□□□□□ -2.09
UBP1YDL122W AEP1P32493 518 aa1.99□□□□□ -2.09
UBP1YDL122W KKQ8P36004 724 aa1.99□□□□□ -2.09
UBP1YDL122W CMC1P36064 111 aa1.99□□□□□ -2.09
UBP1YDL122W ECM14P38836 430 aa1.99□□□□□ -2.09
UBP1YDL122W REV7P38927 245 aa1.99□□□□□ -2.09
UBP1YDL122W SEO1P39709 593 aa1.99□□□□□ -2.09
UBP1YDL122W ICE2P40499 491 aa1.99□□□□□ -2.09
UBP1YDL122W EFM4P40516 257 aa1.99□□□□□ -2.09
UBP1YDL122W QRI1P43123 477 aaKnown RBP1.99□□□□□ -2.09
UBP1YDL122W CTK2P46962 323 aa1.99□□□□□ -2.09
UBP1YDL122W IMO32P53219 342 aa1.99□□□□□ -2.09
UBP1YDL122W YGR079WP53249 370 aa1.99□□□□□ -2.09
UBP1YDL122W SLI1P53304 468 aa1.99□□□□□ -2.09
UBP1YDL122W EFM6P53970 246 aa1.99□□□□□ -2.09
UBP1YDL122W EFR3Q03653 782 aaKnown RBP1.99□□□□□ -2.09
UBP1YDL122W RQC1Q05468 723 aaKnown RBP1.99□□□□□ -2.09
UBP1YDL122W VTA1Q06263 330 aa1.99□□□□□ -2.09
UBP1YDL122W RRP9Q06506 573 aaKnown RBP1.99□□□□□ -2.09
UBP1YDL122W GEP3Q08622 556 aa1.99□□□□□ -2.09
UBP1YDL122W YOR114WQ12219 294 aa1.99□□□□□ -2.09
UBP1YDL122W SKS1Q12505 502 aa1.99□□□□□ -2.09
UBP1YDL122W MET3P08536 511 aa1.99□□□□□ -2.09
UBP1YDL122W PRP16P15938 1071 aaPredicted RBP1.99□□□□□ -2.09
UBP1YDL122W RPO26P20435 155 aa1.99□□□□□ -2.09
UBP1YDL122W ERV1P27882 189 aa1.99□□□□□ -2.09
UBP1YDL122W DEF1P35732 738 aaKnown RBP1.99□□□□□ -2.09
UBP1YDL122W SNU114P36048 1008 aaKnown RBP1.99□□□□□ -2.09
UBP1YDL122W ELF1P36053 145 aa1.99□□□□□ -2.09
UBP1YDL122W ARO9P38840 513 aaPredicted RBP1.99□□□□□ -2.09
UBP1YDL122W PET130P47065 347 aa1.99□□□□□ -2.09
UBP1YDL122W MDE1P47095 244 aa1.99□□□□□ -2.09
UBP1YDL122W SBH2P52871 88 aa1.99□□□□□ -2.09
UBP1YDL122W TWF1P53250 332 aa1.99□□□□□ -2.09
UBP1YDL122W HST1P53685 503 aa1.99□□□□□ -2.09
UBP1YDL122W RNY1Q02933 434 aaKnown RBP1.99□□□□□ -2.09
UBP1YDL122W CGI121Q03705 181 aaKnown RBP1.99□□□□□ -2.09
UBP1YDL122W USA1Q03714 838 aa1.99□□□□□ -2.09
UBP1YDL122W DLT1Q04216 342 aa1.99□□□□□ -2.09
UBP1YDL122W ERV41Q04651 352 aa1.99□□□□□ -2.09
UBP1YDL122W SWC7Q06707 132 aa1.99□□□□□ -2.09
UBP1YDL122W LUC7Q07508 261 aaPredicted RBP1.99□□□□□ -2.09
UBP1YDL122W GPN2Q08726 347 aaPredicted RBP1.99□□□□□ -2.09
UBP1YDL122W FMP40Q08968 688 aaPredicted RBP1.99□□□□□ -2.09
UBP1YDL122W MLH3Q12083 715 aa1.99□□□□□ -2.09
UBP1YDL122W YLR111WQ12528 110 aa1.99□□□□□ -2.09
UBP1YDL122W YOS9Q99220 542 aa1.99□□□□□ -2.09
UBP1YDL122W YML002WP0CF17 737 aa1.98□□□□□ -2.09
UBP1YDL122W RRP43P25359 394 aaPredicted RBP1.98□□□□□ -2.09
UBP1YDL122W TAH1P25638 111 aaPredicted RBP1.98□□□□□ -2.09
UBP1YDL122W ATS1P31386 333 aa1.98□□□□□ -2.09
UBP1YDL122W SPC110P32380 944 aa1.98□□□□□ -2.09
UBP1YDL122W MEI5P32489 222 aa1.98□□□□□ -2.09
UBP1YDL122W SIP1P32578 815 aa1.98□□□□□ -2.09
UBP1YDL122W RPS27AP35997 82 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W RPS27BP38711 82 aa1.98□□□□□ -2.09
UBP1YDL122W HRB1P38922 454 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
UBP1YDL122W SPO73P40031 143 aa1.98□□□□□ -2.09
UBP1YDL122W BUR6P40096 142 aa1.98□□□□□ -2.09
UBP1YDL122W ATF1P40353 525 aa1.98□□□□□ -2.09
UBP1YDL122W AYR1P40471 297 aa1.98□□□□□ -2.09
UBP1YDL122W SEC27P41811 889 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W HXT14P42833 540 aa1.98□□□□□ -2.09
UBP1YDL122W CAK1P43568 368 aaPredicted RBP1.98□□□□□ -2.09
UBP1YDL122W MDV1P47025 714 aa1.98□□□□□ -2.09
UBP1YDL122W EMC2P47133 292 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W UBC11P52492 156 aa1.98□□□□□ -2.09
UBP1YDL122W FHN1P53279 174 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms