RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C UIP4Q08926 304 aa3.86□□□□□ -1.79
RPN6YDL097C YPR202WQ08993 238 aa3.86□□□□□ -1.79
RPN6YDL097C YPR064WQ12492 139 aa3.86□□□□□ -1.79
RPN6YDL097C YAP1P19880 650 aaKnown RBP3.85□□□□□ -1.79
RPN6YDL097C CYS4P32582 507 aaKnown RBP3.85□□□□□ -1.79
RPN6YDL097C HES1P35843 434 aa3.85□□□□□ -1.79
RPN6YDL097C AUR1P36107 401 aaPredicted RBP3.85□□□□□ -1.79
RPN6YDL097C AIM3P38266 947 aaKnown RBP3.85□□□□□ -1.79
RPN6YDL097C SSZ1P38788 538 aaKnown RBP3.85□□□□□ -1.79
RPN6YDL097C CTF8P38877 133 aa3.85□□□□□ -1.79
RPN6YDL097C FLO5P38894 1075 aa3.85□□□□□ -1.79
RPN6YDL097C AST2P39945 430 aaKnown RBP3.85□□□□□ -1.79
RPN6YDL097C ALG5P40350 334 aa3.85□□□□□ -1.79
RPN6YDL097C CAB2P40506 365 aa3.85□□□□□ -1.79
RPN6YDL097C IDP2P41939 412 aa3.85□□□□□ -1.79
RPN6YDL097C SSY5P47002 699 aa3.85□□□□□ -1.79
RPN6YDL097C YPT11P48559 417 aa3.85□□□□□ -1.79
RPN6YDL097C IMA1P53051 589 aa3.85□□□□□ -1.79
RPN6YDL097C MRPL1Q04599 285 aa3.85□□□□□ -1.79
RPN6YDL097C BCH1Q05029 724 aa3.85□□□□□ -1.79
RPN6YDL097C RQC1Q05468 723 aaKnown RBP3.85□□□□□ -1.79
RPN6YDL097C REX4Q08237 289 aa3.85□□□□□ -1.79
RPN6YDL097C RRP42Q12277 265 aaPredicted RBP3.85□□□□□ -1.79
RPN6YDL097C ICT1Q12385 394 aa3.85□□□□□ -1.79
RPN6YDL097C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
RPN6YDL097C STE3P06783 470 aa3.84□□□□□ -1.79
RPN6YDL097C SPB1P25582 841 aaPredicted RBP3.84□□□□□ -1.79
RPN6YDL097C YCL068CP25593 260 aa3.84□□□□□ -1.79
RPN6YDL097C ITR1P30605 584 aa3.84□□□□□ -1.79
RPN6YDL097C HXT4P32467 576 aa3.84□□□□□ -1.79
RPN6YDL097C HSP150P32478 413 aa3.84□□□□□ -1.79
RPN6YDL097C SMI1P32566 505 aa3.84□□□□□ -1.79
RPN6YDL097C PTR2P32901 601 aa3.84□□□□□ -1.79
RPN6YDL097C EFM1P38732 585 aa3.84□□□□□ -1.79
RPN6YDL097C SMF2P38778 549 aa3.84□□□□□ -1.79
RPN6YDL097C NPT1P39683 429 aaKnown RBP3.84□□□□□ -1.79
RPN6YDL097C SDP1P40479 209 aa3.84□□□□□ -1.79
RPN6YDL097C DPH1P40487 425 aaKnown RBP3.84□□□□□ -1.79
RPN6YDL097C ERR3P42222 437 aa3.84□□□□□ -1.79
RPN6YDL097C MTR3P48240 250 aaPredicted RBP3.84□□□□□ -1.79
RPN6YDL097C SDT1P53078 280 aa3.84□□□□□ -1.79
RPN6YDL097C YIP4P53093 235 aa3.84□□□□□ -1.79
RPN6YDL097C MPA43P53583 542 aaPredicted RBP3.84□□□□□ -1.79
RPN6YDL097C SVL3Q03088 825 aaKnown RBP3.84□□□□□ -1.79
RPN6YDL097C PRP3Q03338 469 aaPredicted RBP3.84□□□□□ -1.79
RPN6YDL097C RSM28Q03430 361 aa3.84□□□□□ -1.79
RPN6YDL097C PDR8Q06149 701 aa3.84□□□□□ -1.79
RPN6YDL097C SLD7Q08457 257 aa3.84□□□□□ -1.79
RPN6YDL097C LSP1Q12230 341 aaKnown RBP3.84□□□□□ -1.79
RPN6YDL097C RUP1Q12242 671 aa3.84□□□□□ -1.79
RPN6YDL097C CYC1P00044 109 aaPredicted RBP3.83□□□□□ -1.8
RPN6YDL097C RAD10P06838 210 aa3.83□□□□□ -1.8
RPN6YDL097C ARD1P07347 238 aaPredicted RBP3.83□□□□□ -1.8
RPN6YDL097C GPA1P08539 472 aa3.83□□□□□ -1.8
RPN6YDL097C YER190C-BP0CX94 160 aa3.83□□□□□ -1.8
RPN6YDL097C YEL077W-AP0CX95 160 aa3.83□□□□□ -1.8
RPN6YDL097C YGR296C-BP0CX96 160 aa3.83□□□□□ -1.8
RPN6YDL097C YPL283W-BP0CX97 160 aa3.83□□□□□ -1.8
RPN6YDL097C YPR204C-AP0CX98 160 aa3.83□□□□□ -1.8
RPN6YDL097C YFL068WP0CX99 160 aa3.83□□□□□ -1.8
RPN6YDL097C YLL066W-AP0CY00 160 aa3.83□□□□□ -1.8
RPN6YDL097C YLL067W-AP0CY01 160 aa3.83□□□□□ -1.8
RPN6YDL097C TFS1P14306 219 aa3.83□□□□□ -1.8
RPN6YDL097C PHO81P17442 1178 aa3.83□□□□□ -1.8
RPN6YDL097C ATP12P22135 325 aa3.83□□□□□ -1.8
RPN6YDL097C SEC14P24280 304 aaKnown RBP3.83□□□□□ -1.8
RPN6YDL097C SDH3P33421 198 aa3.83□□□□□ -1.8
RPN6YDL097C YKL100CP34248 587 aa3.83□□□□□ -1.8
RPN6YDL097C VPS51P36116 164 aa3.83□□□□□ -1.8
RPN6YDL097C MRPL39P36533 70 aa3.83□□□□□ -1.8
RPN6YDL097C YML6P51998 286 aa3.83□□□□□ -1.8
RPN6YDL097C SRL2Q12020 392 aa3.83□□□□□ -1.8
RPN6YDL097C MSS18P08593 268 aa3.82□□□□□ -1.8
RPN6YDL097C CLB2P24869 491 aa3.82□□□□□ -1.8
RPN6YDL097C RAD51P25454 400 aa3.82□□□□□ -1.8
RPN6YDL097C DAL80P26343 269 aa3.82□□□□□ -1.8
RPN6YDL097C PRE2P30656 287 aaKnown RBP3.82□□□□□ -1.8
RPN6YDL097C PRY2P36110 329 aa3.82□□□□□ -1.8
RPN6YDL097C CBP4P37267 147 aa3.82□□□□□ -1.8
RPN6YDL097C BNA4P38169 460 aa3.82□□□□□ -1.8
RPN6YDL097C EXO84P38261 753 aa3.82□□□□□ -1.8
RPN6YDL097C LNP1P38878 278 aa3.82□□□□□ -1.8
RPN6YDL097C PZF1P39933 429 aa3.82□□□□□ -1.8
RPN6YDL097C EGT2P42835 1041 aa3.82□□□□□ -1.8
RPN6YDL097C QRI7P43122 407 aa3.82□□□□□ -1.8
RPN6YDL097C TIS11P47977 285 aa3.82□□□□□ -1.8
RPN6YDL097C VPS71Q03433 280 aa3.82□□□□□ -1.8
RPN6YDL097C ASM4Q05166 528 aa3.82□□□□□ -1.8
RPN6YDL097C YTH1Q06102 208 aaPredicted RBP3.82□□□□□ -1.8
RPN6YDL097C CSI2Q08054 341 aa3.82□□□□□ -1.8
RPN6YDL097C YOR365CQ08844 703 aa3.82□□□□□ -1.8
RPN6YDL097C YOL114CQ12322 202 aa3.82□□□□□ -1.8
RPN6YDL097C RPS17AP02407 136 aaKnown RBP3.81□□□□□ -1.8
RPN6YDL097C RPP2AP05319 106 aaKnown RBP3.81□□□□□ -1.8
RPN6YDL097C GCD2P12754 651 aaPredicted RBP3.81□□□□□ -1.8
RPN6YDL097C MSI1P13712 422 aa3.81□□□□□ -1.8
RPN6YDL097C RPS17BP14127 136 aaKnown RBP3.81□□□□□ -1.8
RPN6YDL097C PDX1P16451 410 aa3.81□□□□□ -1.8
RPN6YDL097C SAN1P22470 610 aa3.81□□□□□ -1.8
RPN6YDL097C SED4P25365 1065 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 100.5 ms