RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W RPS16BP0CX52 143 aaKnown RBP2.49□□□□□ -2.01
SPB1YCL054W PUT4P15380 627 aa2.49□□□□□ -2.01
SPB1YCL054W SRV2P17555 526 aaKnown RBP2.49□□□□□ -2.01
SPB1YCL054W COQ3P27680 312 aa2.49□□□□□ -2.01
SPB1YCL054W DPH5P32469 300 aaPredicted RBP2.49□□□□□ -2.01
SPB1YCL054W NRP1P32770 719 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SPB1YCL054W BUD2P33314 1104 aa2.49□□□□□ -2.01
SPB1YCL054W TPO5P36029 618 aa2.49□□□□□ -2.01
SPB1YCL054W MCR1P36060 302 aaKnown RBP2.49□□□□□ -2.01
SPB1YCL054W SSO2P39926 295 aa2.49□□□□□ -2.01
SPB1YCL054W AIM20P40451 204 aa2.49□□□□□ -2.01
SPB1YCL054W IAH1P41734 238 aa2.49□□□□□ -2.01
SPB1YCL054W POP1P41812 875 aa2.49□□□□□ -2.01
SPB1YCL054W QRI1P43123 477 aaKnown RBP2.49□□□□□ -2.01
SPB1YCL054W SCD6P45978 349 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SPB1YCL054W GCD14P46959 383 aaPredicted RBP2.49□□□□□ -2.01
SPB1YCL054W LSC1P53598 329 aaKnown RBP2.49□□□□□ -2.01
SPB1YCL054W ARK1P53974 638 aa2.49□□□□□ -2.01
SPB1YCL054W GIP3Q03016 1276 aa2.49□□□□□ -2.01
SPB1YCL054W RSC9Q03124 581 aa2.49□□□□□ -2.01
SPB1YCL054W THI20Q08224 551 aa2.49□□□□□ -2.01
SPB1YCL054W DSE3Q08729 430 aa2.49□□□□□ -2.01
SPB1YCL054W RMD5Q12508 421 aa2.49□□□□□ -2.01
SPB1YCL054W PDE2P06776 526 aa2.49□□□□□ -2.01
SPB1YCL054W RPL12AP0CX53 165 aaKnown RBP2.49□□□□□ -2.01
SPB1YCL054W RPL12BP0CX54 165 aa2.49□□□□□ -2.01
SPB1YCL054W RPB4P20433 221 aaPredicted RBP2.49□□□□□ -2.01
SPB1YCL054W RPB8P20436 146 aa2.49□□□□□ -2.01
SPB1YCL054W YCR007CP25354 239 aa2.49□□□□□ -2.01
SPB1YCL054W EFB1P32471 206 aaKnown RBP2.49□□□□□ -2.01
SPB1YCL054W DOA4P32571 926 aa2.49□□□□□ -2.01
SPB1YCL054W INM1P38710 295 aa2.49□□□□□ -2.01
SPB1YCL054W SPC97P38863 823 aa2.49□□□□□ -2.01
SPB1YCL054W MNN9P39107 395 aaKnown RBP2.49□□□□□ -2.01
SPB1YCL054W ALD5P40047 520 aaKnown RBP2.49□□□□□ -2.01
SPB1YCL054W BIO3P50277 480 aa2.49□□□□□ -2.01
SPB1YCL054W LIF1P53150 421 aa2.49□□□□□ -2.01
SPB1YCL054W GPI15P53961 229 aa2.49□□□□□ -2.01
SPB1YCL054W TAF12Q03761 539 aa2.49□□□□□ -2.01
SPB1YCL054W SEG1Q04279 960 aa2.49□□□□□ -2.01
SPB1YCL054W URC2Q04411 772 aa2.49□□□□□ -2.01
SPB1YCL054W MRPL1Q04599 285 aa2.49□□□□□ -2.01
SPB1YCL054W YMR321CQ04898 105 aa2.49□□□□□ -2.01
SPB1YCL054W BOP2Q06150 570 aa2.49□□□□□ -2.01
SPB1YCL054W SSK1Q07084 712 aa2.49□□□□□ -2.01
SPB1YCL054W ERP3Q12403 225 aa2.49□□□□□ -2.01
SPB1YCL054W SRN2Q99176 213 aa2.49□□□□□ -2.01
SPB1YCL054W CAR2P07991 424 aaKnown RBP2.48□□□□□ -2.01
SPB1YCL054W PRB1P09232 635 aa2.48□□□□□ -2.01
SPB1YCL054W YER190C-BP0CX94 160 aa2.48□□□□□ -2.01
SPB1YCL054W YEL077W-AP0CX95 160 aa2.48□□□□□ -2.01
SPB1YCL054W YGR296C-BP0CX96 160 aa2.48□□□□□ -2.01
SPB1YCL054W YPL283W-BP0CX97 160 aa2.48□□□□□ -2.01
SPB1YCL054W YPR204C-AP0CX98 160 aa2.48□□□□□ -2.01
SPB1YCL054W UNG1P12887 359 aa2.48□□□□□ -2.01
SPB1YCL054W POX1P13711 748 aa2.48□□□□□ -2.01
SPB1YCL054W GID7P25569 745 aa2.48□□□□□ -2.01
SPB1YCL054W ITR1P30605 584 aa2.48□□□□□ -2.01
SPB1YCL054W KRE6P32486 720 aa2.48□□□□□ -2.01
SPB1YCL054W ECM25P32525 599 aa2.48□□□□□ -2.01
SPB1YCL054W TOA2P32774 122 aa2.48□□□□□ -2.01
SPB1YCL054W DBP7P36120 742 aaKnown RBP2.48□□□□□ -2.01
SPB1YCL054W OLA1P38219 394 aaKnown RBP2.48□□□□□ -2.01
SPB1YCL054W YHR122WP38829 231 aa2.48□□□□□ -2.01
SPB1YCL054W AIM10P39965 576 aaKnown RBP2.48□□□□□ -2.01
SPB1YCL054W SCC4P40090 624 aa2.48□□□□□ -2.01
SPB1YCL054W YJL070CP40361 888 aa2.48□□□□□ -2.01
SPB1YCL054W GUF1P46943 645 aa2.48□□□□□ -2.01
SPB1YCL054W ATP23P53722 227 aa2.48□□□□□ -2.01
SPB1YCL054W PRM1P53835 661 aa2.48□□□□□ -2.01
SPB1YCL054W YIF1P53845 314 aaKnown RBP2.48□□□□□ -2.01
SPB1YCL054W RRB1Q04225 511 aaKnown RBP2.48□□□□□ -2.01
SPB1YCL054W AFT2Q08957 416 aa2.48□□□□□ -2.01
SPB1YCL054W ORT1Q12375 292 aa2.48□□□□□ -2.01
SPB1YCL054W GAL7P08431 366 aa2.48□□□□□ -2.01
SPB1YCL054W GAL3P13045 520 aa2.48□□□□□ -2.01
SPB1YCL054W ILV6P25605 309 aaKnown RBP2.48□□□□□ -2.01
SPB1YCL054W MSN4P33749 630 aa2.48□□□□□ -2.01
SPB1YCL054W PHD1P36093 366 aa2.48□□□□□ -2.01
SPB1YCL054W APM1Q00776 475 aaPredicted RBP2.48□□□□□ -2.01
SPB1YCL054W SNZ1Q03148 297 aa2.48□□□□□ -2.01
SPB1YCL054W CTL1Q03220 320 aaKnown RBP2.48□□□□□ -2.01
SPB1YCL054W NUP53Q03790 475 aa2.48□□□□□ -2.01
SPB1YCL054W INP2Q03824 705 aa2.48□□□□□ -2.01
SPB1YCL054W ARR1Q06596 294 aa2.48□□□□□ -2.01
SPB1YCL054W YLR413WQ06689 675 aa2.48□□□□□ -2.01
SPB1YCL054W YPR022CQ12139 1133 aa2.48□□□□□ -2.01
SPB1YCL054W LDB17Q12342 491 aa2.48□□□□□ -2.01
SPB1YCL054W PFK27Q12471 397 aaPredicted RBP2.48□□□□□ -2.01
SPB1YCL054W MRPL23Q12487 163 aaPredicted RBP2.48□□□□□ -2.01
SPB1YCL054W MYO1P08964 1928 aa2.48□□□□□ -2.01
SPB1YCL054W OPI3P05375 206 aa2.47□□□□□ -2.01
SPB1YCL054W MATALPHA2P0CY08 210 aa2.47□□□□□ -2.01
SPB1YCL054W HMLALPHA2P0CY09 210 aa2.47□□□□□ -2.01
SPB1YCL054W MAS2P11914 482 aa2.47□□□□□ -2.01
SPB1YCL054W GCD2P12754 651 aaPredicted RBP2.47□□□□□ -2.01
SPB1YCL054W FRE1P32791 686 aa2.47□□□□□ -2.01
SPB1YCL054W TIF5P38431 405 aaKnown RBP2.47□□□□□ -2.01
SPB1YCL054W PAC11P40960 533 aa2.47□□□□□ -2.01
SPB1YCL054W RIB4P50861 169 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms