RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W GSF2Q04697 403 aaKnown RBP4.43□□□□□ -1.7
VHC1YBR235W RRT8Q08219 342 aa4.43□□□□□ -1.7
VHC1YBR235W GRE2Q12068 342 aaKnown RBP4.43□□□□□ -1.7
VHC1YBR235W LEU9Q12166 604 aaKnown RBP4.43□□□□□ -1.7
VHC1YBR235W BCY1P07278 416 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W SWI5P08153 709 aa4.42□□□□□ -1.7
VHC1YBR235W MAG1P22134 296 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W DCC1P25559 380 aa4.42□□□□□ -1.7
VHC1YBR235W GID7P25569 745 aa4.42□□□□□ -1.7
VHC1YBR235W FAA1P30624 700 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W CTF13P35203 478 aa4.42□□□□□ -1.7
VHC1YBR235W PRS3P38689 320 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W LRP1P38801 184 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W RBG1P39729 369 aa4.42□□□□□ -1.7
VHC1YBR235W ASG7P46993 209 aa4.42□□□□□ -1.7
VHC1YBR235W ASK10P48361 1146 aa4.42□□□□□ -1.7
VHC1YBR235W SWC4P53201 476 aa4.42□□□□□ -1.7
VHC1YBR235W YNR066CP53752 436 aa4.42□□□□□ -1.7
VHC1YBR235W RPA49Q01080 415 aaPredicted RBP4.42□□□□□ -1.7
VHC1YBR235W YVH1Q02256 364 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W YPL067CQ02754 198 aa4.42□□□□□ -1.7
VHC1YBR235W YPL107WQ02873 248 aa4.42□□□□□ -1.7
VHC1YBR235W SMA2Q04658 369 aa4.42□□□□□ -1.7
VHC1YBR235W ENT4Q07872 247 aa4.42□□□□□ -1.7
VHC1YBR235W REX4Q08237 289 aa4.42□□□□□ -1.7
VHC1YBR235W SRO7Q12038 1033 aa4.42□□□□□ -1.7
VHC1YBR235W RPB3P16370 318 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W PDX1P16451 410 aa4.42□□□□□ -1.7
VHC1YBR235W ERD2P18414 219 aa4.42□□□□□ -1.7
VHC1YBR235W MRPL15P36523 253 aa4.42□□□□□ -1.7
VHC1YBR235W ECM8P38246 354 aa4.42□□□□□ -1.7
VHC1YBR235W URA8P38627 578 aaPredicted RBP4.42□□□□□ -1.7
VHC1YBR235W SPL2P38839 148 aa4.42□□□□□ -1.7
VHC1YBR235W FMO1P38866 432 aa4.42□□□□□ -1.7
VHC1YBR235W ARF3P40994 183 aaRIP-Chip data4.42□□□□□ -1.7not detected
VHC1YBR235W CCC1P47818 322 aa4.42□□□□□ -1.7
VHC1YBR235W YDL183CP48569 320 aa4.42□□□□□ -1.7
VHC1YBR235W PKP2P53170 491 aa4.42□□□□□ -1.7
VHC1YBR235W YNR065CP53751 1116 aa4.42□□□□□ -1.7
VHC1YBR235W TVP15Q03860 143 aa4.42□□□□□ -1.7
VHC1YBR235W SEC13Q04491 297 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W ISR1Q06098 443 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W YPL257WQ08974 193 aa4.42□□□□□ -1.7
VHC1YBR235W YGK3Q12222 375 aaPredicted RBP4.42□□□□□ -1.7
VHC1YBR235W YLR108CQ12259 485 aa4.42□□□□□ -1.7
VHC1YBR235W Q0144Q9ZZW2 109 aa4.42□□□□□ -1.7
VHC1YBR235W GAL4P04386 881 aa4.42□□□□□ -1.7
VHC1YBR235W ASP3-2P0CX77 362 aa4.42□□□□□ -1.7
VHC1YBR235W ASP3-3P0CX78 362 aa4.42□□□□□ -1.7
VHC1YBR235W ASP3-4P0CX79 362 aa4.42□□□□□ -1.7
VHC1YBR235W ASP3-1P0CZ17 362 aa4.42□□□□□ -1.7
VHC1YBR235W DHH1P39517 506 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W ACO2P39533 789 aa4.42□□□□□ -1.7
VHC1YBR235W SCC4P40090 624 aa4.42□□□□□ -1.7
VHC1YBR235W RPA34P47006 233 aaPredicted RBP4.42□□□□□ -1.7
VHC1YBR235W YNL184CP53876 108 aa4.42□□□□□ -1.7
VHC1YBR235W TOF2Q02208 771 aa4.42□□□□□ -1.7
VHC1YBR235W YDR056CQ12025 205 aa4.42□□□□□ -1.7
VHC1YBR235W YAH1Q12184 172 aaKnown RBP4.42□□□□□ -1.7
VHC1YBR235W RGT2Q12300 763 aa4.42□□□□□ -1.7
VHC1YBR235W YPR145C-AQ2V2P0 78 aa4.42□□□□□ -1.7
VHC1YBR235W CDC7P06243 507 aa4.41□□□□□ -1.7
VHC1YBR235W SSA3P09435 649 aaKnown RBP4.41□□□□□ -1.7
VHC1YBR235W ERR1P0CX10 437 aa4.41□□□□□ -1.7
VHC1YBR235W ERR2P0CX11 437 aa4.41□□□□□ -1.7
VHC1YBR235W RPL35AP0CX84 120 aaKnown RBP4.41□□□□□ -1.7
VHC1YBR235W RPL35BP0CX85 120 aaKnown RBP4.41□□□□□ -1.7
VHC1YBR235W GAP1P19145 602 aaPredicted RBP4.41□□□□□ -1.7
VHC1YBR235W PRE7P23724 241 aaKnown RBP4.41□□□□□ -1.7
VHC1YBR235W EMC1P25574 760 aa4.41□□□□□ -1.7
VHC1YBR235W NAB2P32505 525 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
VHC1YBR235W SHP1P34223 423 aa4.41□□□□□ -1.7
VHC1YBR235W SKT5P34226 696 aa4.41□□□□□ -1.7
VHC1YBR235W CTP1P38152 299 aa4.41□□□□□ -1.7
VHC1YBR235W ERR3P42222 437 aa4.41□□□□□ -1.7
VHC1YBR235W NIT2P47016 307 aa4.41□□□□□ -1.7
VHC1YBR235W ALG12P53730 551 aa4.41□□□□□ -1.7
VHC1YBR235W ARG5,6Q01217 863 aa4.41□□□□□ -1.7
VHC1YBR235W LRS4Q04087 347 aaKnown RBP4.41□□□□□ -1.7
VHC1YBR235W PPN1Q04119 674 aa4.41□□□□□ -1.7
VHC1YBR235W NEJ1Q06148 342 aa4.41□□□□□ -1.7
VHC1YBR235W YLR326WQ06170 240 aaKnown RBP4.41□□□□□ -1.7
VHC1YBR235W YLR126CQ12288 251 aa4.41□□□□□ -1.7
VHC1YBR235W ERP3Q12403 225 aa4.41□□□□□ -1.7
VHC1YBR235W EAF3Q12432 401 aa4.41□□□□□ -1.7
VHC1YBR235W FSH3Q99369 266 aa4.41□□□□□ -1.7
VHC1YBR235W ZRC1P20107 442 aa4.41□□□□□ -1.7
VHC1YBR235W ABD1P32783 436 aaPredicted RBP4.41□□□□□ -1.7
VHC1YBR235W BCS1P32839 456 aa4.41□□□□□ -1.7
VHC1YBR235W AHP1P38013 176 aaKnown RBP4.41□□□□□ -1.7
VHC1YBR235W ARN1P38731 627 aa4.41□□□□□ -1.7
VHC1YBR235W YGR042WP53227 271 aa4.41□□□□□ -1.7
VHC1YBR235W EOS1P53938 366 aa4.41□□□□□ -1.7
VHC1YBR235W KIN4Q01919 800 aa4.41□□□□□ -1.7
VHC1YBR235W YLR455WQ06188 304 aa4.41□□□□□ -1.7
VHC1YBR235W SKG3Q06315 1026 aa4.41□□□□□ -1.7
VHC1YBR235W BSP1Q06604 576 aa4.41□□□□□ -1.7
VHC1YBR235W CSI2Q08054 341 aa4.41□□□□□ -1.7
VHC1YBR235W FAL1Q12099 399 aaKnown RBP4.41□□□□□ -1.7
VHC1YBR235W AIM45Q12480 344 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms