RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C SLC1P33333 303 aa1.72□□□□□ -2.13
PEP1YBL017C ROT2P38138 954 aa1.72□□□□□ -2.13
PEP1YBL017C TRM7P38238 310 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C AIM3P38266 947 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C RFC3P38629 340 aa1.72□□□□□ -2.13
PEP1YBL017C PLB1P39105 664 aa1.72□□□□□ -2.13
PEP1YBL017C CIN4P39110 191 aa1.72□□□□□ -2.13
PEP1YBL017C PTR3P43606 678 aa1.72□□□□□ -2.13
PEP1YBL017C COX16P47081 118 aa1.72□□□□□ -2.13
PEP1YBL017C EMC4P53073 190 aa1.72□□□□□ -2.13
PEP1YBL017C NSA1P53136 463 aaPredicted RBP1.72□□□□□ -2.13
PEP1YBL017C MPP6P53725 186 aaPredicted RBP1.72□□□□□ -2.13
PEP1YBL017C PRP38Q00723 242 aaPredicted RBP1.72□□□□□ -2.13
PEP1YBL017C UBP2Q01476 1272 aa1.72□□□□□ -2.13
PEP1YBL017C BSC2Q05611 235 aa1.72□□□□□ -2.13
PEP1YBL017C PUN1Q06991 263 aa1.72□□□□□ -2.13
PEP1YBL017C YPL199CQ08954 240 aa1.72□□□□□ -2.13
PEP1YBL017C PHO2P07269 559 aa1.72□□□□□ -2.13
PEP1YBL017C SPS4P09937 338 aa1.72□□□□□ -2.13
PEP1YBL017C YBL010CP32788 280 aa1.72□□□□□ -2.13
PEP1YBL017C LOT5P34234 306 aa1.72□□□□□ -2.13
PEP1YBL017C HES1P35843 434 aa1.72□□□□□ -2.13
PEP1YBL017C LHS1P36016 881 aa1.72□□□□□ -2.13
PEP1YBL017C PBP2P38151 413 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
PEP1YBL017C TSC10P38342 320 aa1.72□□□□□ -2.13
PEP1YBL017C GIC1P38785 314 aa1.72□□□□□ -2.13
PEP1YBL017C MNL1P38888 796 aa1.72□□□□□ -2.13
PEP1YBL017C BEM4P39011 633 aa1.72□□□□□ -2.13
PEP1YBL017C MNN9P39107 395 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C PDS1P40316 373 aaPredicted RBP1.72□□□□□ -2.13
PEP1YBL017C SKO1Q02100 647 aa1.72□□□□□ -2.13
PEP1YBL017C YPL108WQ02872 168 aaPredicted RBP1.72□□□□□ -2.13
PEP1YBL017C PRM15Q03262 622 aa1.72□□□□□ -2.13
PEP1YBL017C EMI1Q04406 187 aa1.72□□□□□ -2.13
PEP1YBL017C YDR514CQ04408 483 aa1.72□□□□□ -2.13
PEP1YBL017C RRP45Q05636 305 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C COS7Q07788 383 aa1.72□□□□□ -2.13
PEP1YBL017C YEH2Q07950 538 aa1.72□□□□□ -2.13
PEP1YBL017C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
PEP1YBL017C DBP10Q12389 995 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C YER145C-AA0A023PYF4 145 aa1.72□□□□□ -2.13
PEP1YBL017C SIR3P06701 978 aa1.72□□□□□ -2.13
PEP1YBL017C RPC40P07703 335 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C RPL43AP0CX25 92 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C RPL43BP0CX26 92 aa1.72□□□□□ -2.13
PEP1YBL017C DPM1P14020 267 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C MER1P16523 270 aa1.72□□□□□ -2.13
PEP1YBL017C HOP1P20050 605 aa1.72□□□□□ -2.13
PEP1YBL017C DPB2P24482 689 aaPredicted RBP1.72□□□□□ -2.13
PEP1YBL017C RHB1P25378 209 aa1.72□□□□□ -2.13
PEP1YBL017C SYP1P25623 870 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C TRM5P38793 499 aa1.72□□□□□ -2.13
PEP1YBL017C UIP3P39547 235 aa1.72□□□□□ -2.13
PEP1YBL017C JHD2P47156 728 aaPredicted RBP1.72□□□□□ -2.13
PEP1YBL017C BSC5P53755 489 aa1.72□□□□□ -2.13
PEP1YBL017C SNO2P53823 222 aa1.72□□□□□ -2.13
PEP1YBL017C ELA1P53861 379 aaPredicted RBP1.72□□□□□ -2.13
PEP1YBL017C ERV25P54837 211 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C SMA1Q02651 245 aa1.72□□□□□ -2.13
PEP1YBL017C SRL4Q03085 281 aa1.72□□□□□ -2.13
PEP1YBL017C MAK3Q03503 176 aa1.72□□□□□ -2.13
PEP1YBL017C PLM2Q04383 521 aa1.72□□□□□ -2.13
PEP1YBL017C GPN3Q06543 272 aa1.72□□□□□ -2.13
PEP1YBL017C HNT3Q08702 217 aa1.72□□□□□ -2.13
PEP1YBL017C GET4Q12125 312 aa1.72□□□□□ -2.13
PEP1YBL017C YJR112W-AQ3E743 109 aa1.72□□□□□ -2.13
PEP1YBL017C CDC8P00572 216 aa1.72□□□□□ -2.13
PEP1YBL017C RAD7P06779 565 aa1.72□□□□□ -2.13
PEP1YBL017C YMR085WP0CF18 432 aa1.72□□□□□ -2.13
PEP1YBL017C CKA1P15790 372 aa1.72□□□□□ -2.13
PEP1YBL017C CLB4P24871 460 aa1.72□□□□□ -2.13
PEP1YBL017C PUP1P25043 261 aa1.72□□□□□ -2.13
PEP1YBL017C YCR099CP25657 155 aa1.72□□□□□ -2.13
PEP1YBL017C RAD14P28519 371 aa1.72□□□□□ -2.13
PEP1YBL017C ATS1P31386 333 aa1.72□□□□□ -2.13
PEP1YBL017C APE2P32454 952 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C PTM1P32857 523 aa1.72□□□□□ -2.13
PEP1YBL017C SEC61P32915 480 aa1.72□□□□□ -2.13
PEP1YBL017C YBR096WP38256 230 aa1.72□□□□□ -2.13
PEP1YBL017C TAE1P38340 232 aa1.72□□□□□ -2.13
PEP1YBL017C MED6P38782 295 aa1.72□□□□□ -2.13
PEP1YBL017C ERP5P38819 212 aa1.72□□□□□ -2.13
PEP1YBL017C HRB1P38922 454 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
PEP1YBL017C IES5P40060 125 aa1.72□□□□□ -2.13
PEP1YBL017C SCS2P40075 244 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C RIC1P40395 1056 aa1.72□□□□□ -2.13
PEP1YBL017C QDR2P40474 542 aa1.72□□□□□ -2.13
PEP1YBL017C UTP25P40498 721 aaKnown RBP1.72□□□□□ -2.13
PEP1YBL017C BNA2P47125 453 aa1.72□□□□□ -2.13
PEP1YBL017C CSL4P53859 292 aaPredicted RBP1.72□□□□□ -2.13
PEP1YBL017C DID2P69771 204 aa1.72□□□□□ -2.13
PEP1YBL017C CTF19Q02732 369 aa1.72□□□□□ -2.13
PEP1YBL017C YDR541CQ03049 344 aa1.72□□□□□ -2.13
PEP1YBL017C SNZ1Q03148 297 aa1.72□□□□□ -2.13
PEP1YBL017C YDR209CQ03480 137 aa1.72□□□□□ -2.13
PEP1YBL017C YLR281CQ05863 155 aa1.72□□□□□ -2.13
PEP1YBL017C MCM21Q06675 368 aa1.72□□□□□ -2.13
PEP1YBL017C AVO1Q08236 1176 aa1.72□□□□□ -2.13
PEP1YBL017C MDY2Q12285 212 aa1.72□□□□□ -2.13
PEP1YBL017C BMT6Q12291 365 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms