RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 BUD5P25300 642 aaPredicted RBP8.2□□□□□ -1.1
LSR1LSR1 URK1P27515 501 aa8.2□□□□□ -1.1
LSR1LSR1 PET309P32522 965 aaPredicted RBP8.2□□□□□ -1.1
LSR1LSR1 NAT2P37293 288 aa8.2□□□□□ -1.1
LSR1LSR1 ZTA1P38230 334 aaKnown RBP8.2□□□□□ -1.1
LSR1LSR1 ATG14P38270 344 aa8.2□□□□□ -1.1
LSR1LSR1 YBR242WP38331 238 aa8.2□□□□□ -1.1
LSR1LSR1 SBE22P38814 852 aa8.2□□□□□ -1.1
LSR1LSR1 TAT2P38967 592 aa8.2□□□□□ -1.1
LSR1LSR1 MBP1P39678 833 aa8.2□□□□□ -1.1
LSR1LSR1 GIM4P40005 111 aaKnown RBP8.2□□□□□ -1.1
LSR1LSR1 FAU1P40099 211 aa8.2□□□□□ -1.1
LSR1LSR1 COS12P53053 380 aa8.2□□□□□ -1.1
LSR1LSR1 KXD1P53158 218 aa8.2□□□□□ -1.1
LSR1LSR1 YMR087WQ04299 284 aa8.2□□□□□ -1.1
LSR1LSR1 GAD1Q04792 585 aa8.2□□□□□ -1.1
LSR1LSR1 RGC1Q06108 1083 aaKnown RBP8.2□□□□□ -1.1
LSR1LSR1 DCI1Q08558 271 aa8.2□□□□□ -1.1
LSR1LSR1 HTS1P07263 546 aaKnown RBP8.19□□□□□ -1.1
LSR1LSR1 PHO4P07270 312 aaKnown RBP8.19□□□□□ -1.1
LSR1LSR1 ARE1P25628 610 aa8.19□□□□□ -1.1
LSR1LSR1 LYP1P32487 611 aa8.19□□□□□ -1.1
LSR1LSR1 STE5P32917 917 aa8.19□□□□□ -1.1
LSR1LSR1 MNN2P38069 597 aa8.19□□□□□ -1.1
LSR1LSR1 MDM31P38880 579 aa8.19□□□□□ -1.1
LSR1LSR1 CCT6P39079 546 aa8.19□□□□□ -1.1
LSR1LSR1 VMA7P39111 118 aa8.19□□□□□ -1.1
LSR1LSR1 SNM1P40993 198 aa8.19□□□□□ -1.1
LSR1LSR1 PRM10P42946 383 aa8.19□□□□□ -1.1
LSR1LSR1 LSB6P42951 607 aa8.19□□□□□ -1.1
LSR1LSR1 YAE1P47118 141 aaPredicted RBP8.19□□□□□ -1.1
LSR1LSR1 EXG2P52911 562 aa8.19□□□□□ -1.1
LSR1LSR1 NBP35P52920 328 aa8.19□□□□□ -1.1
LSR1LSR1 YAT1P80235 687 aa8.19□□□□□ -1.1
LSR1LSR1 TPS1Q00764 495 aaKnown RBP8.19□□□□□ -1.1
LSR1LSR1 MSC1Q03104 513 aa8.19□□□□□ -1.1
LSR1LSR1 TFB4Q12004 338 aa8.19□□□□□ -1.1
LSR1LSR1 RTN2Q12443 393 aa8.19□□□□□ -1.1
LSR1LSR1 KIN2P13186 1147 aaKnown RBP8.18□□□□□ -1.1
LSR1LSR1 DIT1P21623 536 aa8.18□□□□□ -1.1
LSR1LSR1 NIC96P34077 839 aa8.18□□□□□ -1.1
LSR1LSR1 TUL1P36096 758 aa8.18□□□□□ -1.1
LSR1LSR1 NVJ1P38881 321 aa8.18□□□□□ -1.1
LSR1LSR1 AIM10P39965 576 aaKnown RBP8.18□□□□□ -1.1
LSR1LSR1 YER137CP40083 148 aaKnown RBP8.18□□□□□ -1.1
LSR1LSR1 VRG4P40107 337 aa8.18□□□□□ -1.1
LSR1LSR1 APQ12P40532 138 aa8.18□□□□□ -1.1
LSR1LSR1 YFR018CP43599 363 aa8.18□□□□□ -1.1
LSR1LSR1 BPL1P48445 690 aaPredicted RBP8.18□□□□□ -1.1
LSR1LSR1 BIO5P53744 561 aaKnown RBP8.18□□□□□ -1.1
LSR1LSR1 YSA1Q01976 231 aa8.18□□□□□ -1.1
LSR1LSR1 LEE1Q02799 301 aaKnown RBP8.18□□□□□ -1.1
LSR1LSR1 ISU1Q03020 165 aa8.18□□□□□ -1.1
LSR1LSR1 SNZ1Q03148 297 aa8.18□□□□□ -1.1
LSR1LSR1 NSE5Q03718 556 aa8.18□□□□□ -1.1
LSR1LSR1 YPL199CQ08954 240 aa8.18□□□□□ -1.1
LSR1LSR1 YOR019WQ99248 730 aa8.18□□□□□ -1.1
LSR1LSR1 MSB2P32334 1306 aa8.18□□□□□ -1.1
LSR1LSR1 HIP1P06775 603 aa8.17□□□□□ -1.1
LSR1LSR1 GRX2P17695 143 aaKnown RBP8.17□□□□□ -1.1
LSR1LSR1 PET127P32606 800 aa8.17□□□□□ -1.1
LSR1LSR1 KAP122P32767 1081 aa8.17□□□□□ -1.1
LSR1LSR1 MSN2P33748 704 aa8.17□□□□□ -1.1
LSR1LSR1 PEX28P38848 579 aa8.17□□□□□ -1.1
LSR1LSR1 AIM2P39721 246 aa8.17□□□□□ -1.1
LSR1LSR1 LYS12P40495 371 aaKnown RBP8.17□□□□□ -1.1
LSR1LSR1 GDS1P41913 522 aa8.17□□□□□ -1.1
LSR1LSR1 MNN5P46982 586 aa8.17□□□□□ -1.1
LSR1LSR1 MDV1P47025 714 aa8.17□□□□□ -1.1
LSR1LSR1 SGF73P53165 657 aa8.17□□□□□ -1.1
LSR1LSR1 SYF2P53277 215 aaPredicted RBP8.17□□□□□ -1.1
LSR1LSR1 CTK1Q03957 528 aaKnown RBP8.17□□□□□ -1.1
LSR1LSR1 PHO92Q06390 306 aa8.17□□□□□ -1.1
LSR1LSR1 PLB3Q08108 686 aa8.17□□□□□ -1.1
LSR1LSR1 RAX1Q08760 435 aa8.17□□□□□ -1.1
LSR1LSR1 FRE5Q08908 694 aa8.17□□□□□ -1.1
LSR1LSR1 RAD59Q12223 238 aa8.17□□□□□ -1.1
LSR1LSR1 SUL2Q12325 893 aa8.17□□□□□ -1.1
LSR1LSR1 VPS13Q07878 3144 aa8.17□□□□□ -1.1
LSR1LSR1 CAR2P07991 424 aaKnown RBP8.16□□□□□ -1.1
LSR1LSR1 ATG22P25568 528 aa8.16□□□□□ -1.1
LSR1LSR1 BIG1P38813 335 aa8.16□□□□□ -1.1
LSR1LSR1 MLH1P38920 769 aa8.16□□□□□ -1.1
LSR1LSR1 ZRG8P40021 1076 aa8.16□□□□□ -1.1
LSR1LSR1 RTT105P40063 208 aa8.16□□□□□ -1.1
LSR1LSR1 CHA4P43634 648 aa8.16□□□□□ -1.1
LSR1LSR1 IRC18P47056 224 aa8.16□□□□□ -1.1
LSR1LSR1 TPN1P53099 579 aa8.16□□□□□ -1.1
LSR1LSR1 VPS73P53142 486 aaKnown RBP8.16□□□□□ -1.1
LSR1LSR1 TGL2P54857 326 aa8.16□□□□□ -1.1
LSR1LSR1 NUP116Q02630 1113 aa8.16□□□□□ -1.1
LSR1LSR1 FDC1Q03034 503 aa8.16□□□□□ -1.1
LSR1LSR1 AIM36Q03798 255 aa8.16□□□□□ -1.1
LSR1LSR1 ELP6Q04868 273 aa8.16□□□□□ -1.1
LSR1LSR1 RSF1Q05043 376 aa8.16□□□□□ -1.1
LSR1LSR1 ATG10Q07879 167 aa8.16□□□□□ -1.1
LSR1LSR1 RRG7Q08774 242 aaPredicted RBP8.16□□□□□ -1.1
LSR1LSR1 RTT10Q08924 1013 aa8.16□□□□□ -1.1
LSR1LSR1 ENV7Q12003 364 aa8.16□□□□□ -1.1
LSR1LSR1 YOR214CQ12282 236 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms