RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 MCTP2Q6DN12 878 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 LRRC55Q6ZSA7 311 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 CCDC105Q8IYK2 499 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 DCLK2Q8N568 766 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 C12orf76Q8N812 135 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-212ENST00000641247 COLGALT1Q8NBJ5 622 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 FLCNQ8NFG4 579 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 FAM49AQ9H0Q0 323 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-212ENST00000641247 AAASQ9NRG9 546 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 MAP3K20Q9NYL2 800 aaKnown RBP11.23□□□□□ -0.61
PHGDH-212ENST00000641247 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
PHGDH-212ENST00000641247 MYH7BA7E2Y1 1941 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 TBKBP1A7MCY6 615 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 GCOM1H8Y6P7 765 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-212ENST00000641247 ZBTB5O15062 677 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 POLR2MP0CAP2 368 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 STAG3L1P0CL83 205 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 AOC1P19801 751 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 TCF7P36402 384 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-212ENST00000641247 IGBP1P78318 339 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 ENAHQ8N8S7 591 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-212ENST00000641247 PCYT2Q99447 389 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 TCF25Q9BQ70 676 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 ADAM7Q9H2U9 754 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 KAT14Q9H8E8 782 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 CDHR5Q9HBB8 845 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 DLL3Q9NYJ7 618 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 ZSWIM5Q9P217 1185 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-212ENST00000641247 MAD2L2Q9UI95 211 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 ZNF215Q9UL58 517 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-212ENST00000641247 NR2E1Q9Y466 385 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 PCDHB12Q9Y5F1 795 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 R4GN57 208 aa11.22□□□□□ -0.61
PHGDH-212ENST00000641247 FRMPD4Q14CM0 1322 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 IGSF9BQ9UPX0 1349 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 B4E1Z4 1266 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 CYTH3O43739 400 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 INSRRP14616 1297 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 PBX3P40426 434 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 SARSP49591 514 aaKnown RBP11.21□□□□□ -0.61
PHGDH-212ENST00000641247 NMIQ13287 307 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-212ENST00000641247 SPOUT1Q5T280 376 aaKnown RBP11.21□□□□□ -0.61
PHGDH-212ENST00000641247 THNSL1Q8IYQ7 743 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 DTWD2Q8NBA8 298 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 TRAPPC12Q8WVT3 735 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 MRPS27Q92552 414 aaKnown RBP11.21□□□□□ -0.61
PHGDH-212ENST00000641247 ESR2Q92731 530 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 PIGSQ96S52 555 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 ZSCAN10Q96SZ4 725 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-212ENST00000641247 FTHL17Q9BXU8 183 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 MFSD1Q9H3U5 465 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 TRPV2Q9Y5S1 764 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 HCFC2Q9Y5Z7 792 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 SQORQ9Y6N5 450 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 NCOR2Q9Y618 2525 aa11.21□□□□□ -0.61
PHGDH-212ENST00000641247 PLXNA4Q9HCM2 1894 aa11.21□□□□□ -0.62
PHGDH-212ENST00000641247 KIAA1671Q9BY89 1806 aa11.21□□□□□ -0.62
PHGDH-212ENST00000641247 ZMYM6O95789 1325 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 KLRF2D3W0D1 207 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 FIBPO43427 364 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 LMNAP02545 664 aaKnown RBP11.2□□□□□ -0.62
PHGDH-212ENST00000641247 FGFR1P11362 822 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 HOXB8P17481 243 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-212ENST00000641247 MX1P20591 662 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 PLCB3Q01970 1234 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 PUM1Q14671 1186 aaKnown RBP eCLIP11.2□□□□□ -0.62
PHGDH-212ENST00000641247 RSPH3Q86UC2 560 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 HOMER1Q86YM7 354 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 SMC5Q8IY18 1101 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 ZDHHC14Q8IZN3 488 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 KCNG4Q8TDN1 519 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 TMEM40Q8WWA1 233 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 CELF4Q9BZC1 486 aaKnown RBP11.2□□□□□ -0.62
PHGDH-212ENST00000641247 ERVK-5Q9HDB9 667 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 RNF19AQ9NV58 838 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 LRFN2Q9ULH4 789 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 NOC2LQ9Y3T9 749 aaKnown RBP11.2□□□□□ -0.62
PHGDH-212ENST00000641247 PCDHB7Q9Y5E2 793 aa11.2□□□□□ -0.62
PHGDH-212ENST00000641247 PALM3A6NDB9 673 aaPredicted RBP11.19□□□□□ -0.62
PHGDH-212ENST00000641247 C2orf71A6NGG8 1288 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 C9IYK1 514 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 CLASP2O75122 1294 aaKnown RBP11.19□□□□□ -0.62
PHGDH-212ENST00000641247 KCNA2P16389 499 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 NFX1Q12986 1120 aaKnown RBP11.19□□□□□ -0.62
PHGDH-212ENST00000641247 PAK2Q13177 524 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 GNPTABQ3T906 1256 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 IER5Q5VY09 327 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 PDE12Q6L8Q7 609 aaKnown RBP11.19□□□□□ -0.62
PHGDH-212ENST00000641247 SAMD3Q8N6K7 520 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 RIN2Q8WYP3 895 aaPredicted RBP11.19□□□□□ -0.62
PHGDH-212ENST00000641247 EVI5LQ96CN4 794 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 IPO9Q96P70 1041 aaKnown RBP11.19□□□□□ -0.62
PHGDH-212ENST00000641247 SENP7Q9BQF6 1050 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 RIOX1Q9H6W3 641 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 ENTPD7Q9NQZ7 604 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 RGS18Q9NS28 235 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms