RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	NEDD9	Q14511	834 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ATG2A	Q2TAZ0	1938 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	GNPTAB	Q3T906	1256 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	FAM26D	Q5JW98	314 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	METTL7B	Q6UX53	244 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CYFIP1	Q7L576	1253 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	TRIM50	Q86XT4	487 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	TEX2	Q8IWB9	1127 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ADGRA3	Q8IWK6	1321 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	HSCB	Q8IWL3	235 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	FAM177A1	Q8N128	213 aa	Predicted RBP	10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CNTNAP5	Q8WYK1	1306 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SNX21	Q969T3	373 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	GPR20	Q99678	358 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	LLPH	Q9BRT6	129 aa	Known RBP	10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	GLT8D2	Q9H1C3	349 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	IGFLR1	Q9H665	355 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	NCOA5	Q9HCD5	579 aa	Known RBP	10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ZNF215	Q9UL58	517 aa	Predicted RBP	10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	KIF3A	Q9Y496	699 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981		V9GY48	417 aa	Predicted RBP	10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	STXBP3	O00186	592 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	LINC01565	O15544	149 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	TBX10	O75333	385 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	STAM2	O75886	525 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	DEXI	O95424	95 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CHRNA1	P02708	482 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	GHR	P10912	638 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ICAM3	P32942	547 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ADAM17	P78536	824 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	MRPS9	P82933	396 aa	Known RBP	10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	HMGN5	P82970	282 aa	Known RBP	10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	FUT2	Q10981	343 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SMAD4	Q13485	552 aa	Known RBP	10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	NTRK3	Q16288	839 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	UTP14C	Q5TAP6	766 aa	Known RBP	10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	RNF135	Q8IUD6	432 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CMTR1	Q8N1G2	835 aa	Known RBP	10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	LMBR1	Q8WVP7	490 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CLP1	Q92989	425 aa	Known RBP	10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	INPP4A	Q96PE3	977 aa	Predicted RBP	10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SLC26A6	Q9BXS9	759 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CD207	Q9UJ71	328 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	WDFY4	Q6ZS81	3184 aa		10.79	□□□□□ -0.68
CACNA1A-256	ENST00000637981	NRCAM	Q92823	1304 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	STK36	Q9NRP7	1315 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SPATA31C2	B4DYI2	1134 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	FIBP	O43427	364 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	GABBR2	O75899	941 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	MMP1	P03956	469 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SCG2	P13521	617 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	NDUFV1	P49821	464 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SP4	Q02446	784 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SEMA3F	Q13275	785 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	BTG3	Q14201	252 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	PFKFB3	Q16875	520 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	PPP1R18	Q6NYC8	613 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CCDC83	Q8IWF9	413 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	NECAB1	Q8N987	351 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CCDC148	Q8NFR7	591 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	PIBF1	Q8WXW3	757 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	EDA	Q92838	391 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ZNF689	Q96CS4	500 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	TMX3	Q96JJ7	454 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	RC3H2	Q9HBD1	1191 aa	Known RBP	10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ALG13	Q9NP73	1137 aa	Known RBP	10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SH3GLB2	Q9NR46	395 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	RTEL1	Q9NZ71	1219 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	TELO2	Q9Y4R8	837 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	PIEZO1	Q92508	2521 aa		10.78	□□□□□ -0.68
CACNA1A-256	ENST00000637981	FRMPD4	Q14CM0	1322 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981		K7ELQ4	463 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	ENPP3	O14638	875 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	MGAT3	Q09327	533 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	BECN1	Q14457	450 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	LPIN1	Q14693	890 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	MCTP2	Q6DN12	878 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	RUFY4	Q6ZNE9	571 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	HEATR3	Q7Z4Q2	680 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	CUL5	Q93034	780 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	PHKB	Q93100	1093 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	PHOX2B	Q99453	314 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	PLVAP	Q9BX97	442 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	EHMT1	Q9H9B1	1298 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	BARHL2	Q9NY43	387 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	ORC3	Q9UBD5	711 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	C5orf42	Q9H799	3197 aa		10.77	□□□□□ -0.69
CACNA1A-256	ENST00000637981	DGKI	O75912	1065 aa		10.76	□□□□□ -0.69
CACNA1A-256	ENST00000637981	LARGE1	O95461	756 aa		10.76	□□□□□ -0.69
CACNA1A-256	ENST00000637981	HSP90AA1	P07900	732 aa	Known RBP	10.76	□□□□□ -0.69
CACNA1A-256	ENST00000637981	ATXN8OS	P0DMR3	200 aa		10.76	□□□□□ -0.69
CACNA1A-256	ENST00000637981	GNA11	P29992	359 aa		10.76	□□□□□ -0.69
CACNA1A-256	ENST00000637981	NAPA	P54920	295 aa		10.76	□□□□□ -0.69
CACNA1A-256	ENST00000637981	ADAM15	Q13444	863 aa		10.76	□□□□□ -0.69
CACNA1A-256	ENST00000637981	CAMK1	Q14012	370 aa		10.76	□□□□□ -0.69
CACNA1A-256	ENST00000637981	IER5L	Q5T953	404 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms