RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 SAMM50Q9Y512 469 aa20.65■□□□□ 0.9
CLN5-219ENST00000637537 SBF1O95248 1867 aa20.64■□□□□ 0.9
CLN5-219ENST00000637537 DHX15O43143 795 aaKnown RBP20.64■□□□□ 0.9
CLN5-219ENST00000637537 PEX10O60683 326 aa20.64■□□□□ 0.9
CLN5-219ENST00000637537 GCNT3O95395 438 aa20.64■□□□□ 0.9
CLN5-219ENST00000637537 TBC1D8O95759 1140 aa20.64■□□□□ 0.9
CLN5-219ENST00000637537 C1orf186Q6ZWK4 172 aa20.64■□□□□ 0.9
CLN5-219ENST00000637537 KRT26Q7Z3Y9 468 aa20.64■□□□□ 0.9
CLN5-219ENST00000637537 CNKSR2Q8WXI2 1034 aa20.64■□□□□ 0.9
CLN5-219ENST00000637537 MMRN2Q9H8L6 949 aa20.64■□□□□ 0.9
CLN5-219ENST00000637537 SEC31AO94979 1220 aaKnown RBP20.64■□□□□ 0.89
CLN5-219ENST00000637537 EPHA7Q15375 998 aa20.64■□□□□ 0.89
CLN5-219ENST00000637537 SIK3Q9Y2K2 1263 aa20.64■□□□□ 0.89
CLN5-219ENST00000637537 UBIAD1Q9Y5Z9 338 aa20.64■□□□□ 0.89
CLN5-219ENST00000637537 RLFQ13129 1914 aa20.64■□□□□ 0.89
CLN5-219ENST00000637537 ATP9AO75110 1047 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 SASH3O75995 380 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 GHRHRQ02643 423 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 MIER3Q7Z3K6 550 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 KSR1Q8IVT5 923 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 RIT2Q99578 217 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 EFCC1Q9HA90 598 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 AGO4Q9HCK5 861 aaKnown RBP20.63■□□□□ 0.89
CLN5-219ENST00000637537 RNF181Q9P0P0 153 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 TFR2Q9UP52 801 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 PHIPQ8WWQ0 1821 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 DICER1Q9UPY3 1922 aaKnown RBP20.63■□□□□ 0.89
CLN5-219ENST00000637537 TESPA1A2RU30 521 aaPredicted RBP20.63■□□□□ 0.89
CLN5-219ENST00000637537 GOLGA6L9A6NEM1 432 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 USP2O75604 605 aaPredicted RBP20.63■□□□□ 0.89
CLN5-219ENST00000637537 NR2F2P24468 414 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 NMT1P30419 496 aaKnown RBP20.63■□□□□ 0.89
CLN5-219ENST00000637537 GPS2Q13227 327 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 PLS1Q14651 629 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 TMEM132BQ14DG7 1078 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 ZC2HC1CQ53FD0 456 aaPredicted RBP20.63■□□□□ 0.89
CLN5-219ENST00000637537 ARHGEF16Q5VV41 709 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 MAEAQ7L5Y9 396 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 EPM2AIP1Q7L775 607 aaPredicted RBP20.63■□□□□ 0.89
CLN5-219ENST00000637537 MYCT1Q8N699 235 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 MNS1Q8NEH6 495 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 REPS2Q8NFH8 660 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 PDCD2LQ9BRP1 358 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 PXMP2Q9NR77 195 aa20.63■□□□□ 0.89
CLN5-219ENST00000637537 ZNF214Q9UL59 606 aaPredicted RBP20.63■□□□□ 0.89
CLN5-219ENST00000637537 ADM5C9JUS6 153 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 URI1O94763 535 aaPredicted RBP20.62■□□□□ 0.89
CLN5-219ENST00000637537 BCRP11274 1271 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 OAS2P29728 719 aaKnown RBP20.62■□□□□ 0.89
CLN5-219ENST00000637537 KNOP1Q1ED39 458 aaKnown RBP20.62■□□□□ 0.89
CLN5-219ENST00000637537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.62■□□□□ 0.89
CLN5-219ENST00000637537 NACC1Q96RE7 527 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 RASSF4Q9H2L5 321 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 JADE2Q9NQC1 790 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 FAM13AO94988 1023 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 DSG3P32926 999 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 COG2Q14746 738 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 TSR1Q2NL82 804 aaKnown RBP20.62■□□□□ 0.89
CLN5-219ENST00000637537 CRACR2AQ9BSW2 395 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 NUP58Q9BVL2 599 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 REXO2Q9Y3B8 237 aaKnown RBP20.62■□□□□ 0.89
CLN5-219ENST00000637537 AFG3L2Q9Y4W6 797 aa20.62■□□□□ 0.89
CLN5-219ENST00000637537 EPN1Q9Y6I3 576 aaPredicted RBP20.62■□□□□ 0.89
CLN5-219ENST00000637537 TMEM150BA6NC51 233 aa20.61■□□□□ 0.89
CLN5-219ENST00000637537 NDUFA10O95299 355 aa20.61■□□□□ 0.89
CLN5-219ENST00000637537 HOXA7P31268 230 aaPredicted RBP20.61■□□□□ 0.89
CLN5-219ENST00000637537 APBA1Q02410 837 aa20.61■□□□□ 0.89
CLN5-219ENST00000637537 VGLL4Q14135 290 aa20.61■□□□□ 0.89
CLN5-219ENST00000637537 SUPT20HL1Q3ZLR7 823 aa20.61■□□□□ 0.89
CLN5-219ENST00000637537 CC2D1AQ6P1N0 951 aaPredicted RBP20.61■□□□□ 0.89
CLN5-219ENST00000637537 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.61■□□□□ 0.89
CLN5-219ENST00000637537 CLIC2O15247 247 aa20.61■□□□□ 0.89
CLN5-219ENST00000637537 ZBED6P86452 979 aa20.61■□□□□ 0.89
CLN5-219ENST00000637537 ZSCAN26Q16670 478 aa20.61■□□□□ 0.89
CLN5-219ENST00000637537 RETREG2Q8NC44 543 aa20.61■□□□□ 0.89
CLN5-219ENST00000637537 ZCCHC17Q9NP64 241 aaKnown RBP20.61■□□□□ 0.89
CLN5-219ENST00000637537 C19orf81C9J6K1 198 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 PLEKP08567 350 aaPredicted RBP20.6■□□□□ 0.89
CLN5-219ENST00000637537 CASQ1P31415 396 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 KCNMA1Q12791 1236 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 SMC1AQ14683 1233 aaKnown RBP20.6■□□□□ 0.89
CLN5-219ENST00000637537 FOXR2Q6PJQ5 311 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 CATSPERGQ6ZRH7 1159 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 C12orf42Q96LP6 360 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 CEP63Q96MT8 703 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 CARD6Q9BX69 1037 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 TMOD4Q9NZQ9 345 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 TRIM10Q9UDY6 481 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 PSD3Q9NYI0 1048 aa20.6■□□□□ 0.89
CLN5-219ENST00000637537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.6■□□□□ 0.89
CLN5-219ENST00000637537 FRMPD4Q14CM0 1322 aa20.59■□□□□ 0.89
CLN5-219ENST00000637537 TRIM59Q8IWR1 403 aa20.59■□□□□ 0.89
CLN5-219ENST00000637537 PARVGQ9HBI0 331 aa20.59■□□□□ 0.89
CLN5-219ENST00000637537 PPP2R3BQ9Y5P8 575 aa20.59■□□□□ 0.89
CLN5-219ENST00000637537 SNCAIPQ9Y6H5 919 aa20.59■□□□□ 0.89
CLN5-219ENST00000637537 ASTN1O14525 1302 aa20.59■□□□□ 0.89
CLN5-219ENST00000637537 CETN3O15182 167 aa20.59■□□□□ 0.89
CLN5-219ENST00000637537 YBX3P16989 372 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLN5-219ENST00000637537 MEA1Q16626 185 aa20.59■□□□□ 0.89
CLN5-219ENST00000637537 UGCGQ16739 394 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms