RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PDXDC2PQ6P474 469 aa16.15■□□□□ 0.18
LINC00339-208ENST00000634934 POTEGQ6S5H5 508 aa16.15■□□□□ 0.18
LINC00339-208ENST00000634934 CCDC73Q6ZRK6 1079 aa16.15■□□□□ 0.18
LINC00339-208ENST00000634934 TRMT1LQ7Z2T5 733 aaKnown RBP16.15■□□□□ 0.18
LINC00339-208ENST00000634934 TRIM50Q86XT4 487 aa16.15■□□□□ 0.18
LINC00339-208ENST00000634934 ATP6V0A1Q93050 837 aa16.15■□□□□ 0.18
LINC00339-208ENST00000634934 PCYT2Q99447 389 aa16.15■□□□□ 0.18
LINC00339-208ENST00000634934 ZSWIM4Q9H7M6 989 aa16.15■□□□□ 0.18
LINC00339-208ENST00000634934 TUFT1Q9NNX1 390 aa16.15■□□□□ 0.18
LINC00339-208ENST00000634934 KIAA1024Q9UPX6 916 aa16.15■□□□□ 0.18
LINC00339-208ENST00000634934 A0A087WWV3 80 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 IGKV6D-21A0A0A0MT36 114 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 CTAGE5O15320 804 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 ZEB2O60315 1214 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 ADAMTS4O75173 837 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 LGALS2P05162 132 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 PLCG1P19174 1290 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 GRB10Q13322 594 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 RRAGBQ5VZM2 374 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.14■□□□□ 0.18
LINC00339-208ENST00000634934 RNF180Q86T96 592 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 CKAP2LQ8IYA6 745 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 PNMA5Q96PV4 448 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 SMARCAD1Q9H4L7 1026 aa16.14■□□□□ 0.18
LINC00339-208ENST00000634934 DDX19AQ9NUU7 478 aaKnown RBP16.14■□□□□ 0.18
LINC00339-208ENST00000634934 WRAP73Q9P2S5 460 aaPredicted RBP16.14■□□□□ 0.18
LINC00339-208ENST00000634934 TNRC18O15417 2968 aaPredicted RBP16.14■□□□□ 0.17
LINC00339-208ENST00000634934 A0A087X0B3 334 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 POLR2DO15514 142 aaKnown RBP16.14■□□□□ 0.17
LINC00339-208ENST00000634934 SLC26A4O43511 780 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 DKC1O60832 514 aaKnown RBP eCLIP16.14■□□□□ 0.17
LINC00339-208ENST00000634934 LGR5O75473 907 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 TFRCP02786 760 aaKnown RBP16.14■□□□□ 0.17
LINC00339-208ENST00000634934 HOXD8P13378 290 aaPredicted RBP16.14■□□□□ 0.17
LINC00339-208ENST00000634934 LIG1P18858 919 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 MARK3P27448 753 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 SYKP43405 635 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 CHMP4BP1P59074 171 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 DHX58Q96C10 678 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 CRISPLD2Q9H0B8 497 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 NT5C3AQ9H0P0 336 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 TSPY26PQ9H489 355 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 HPSEQ9Y251 543 aa16.14■□□□□ 0.17
LINC00339-208ENST00000634934 MAFBQ9Y5Q3 323 aaPredicted RBP16.14■□□□□ 0.17
LINC00339-208ENST00000634934 EMSYQ7Z589 1322 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 IGSF9BQ9UPX0 1349 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 FAM237AA0A1B0GTK4 181 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 MSNP26038 577 aaKnown RBP16.13■□□□□ 0.17
LINC00339-208ENST00000634934 STAT6P42226 847 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 PRKCEQ02156 737 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 LRRC41Q15345 812 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 TMEM119Q4V9L6 283 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 HYIQ5T013 277 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 CCDC183Q5T5S1 534 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 PLPPR4Q7Z2D5 763 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 AFAP1L1Q8TED9 768 aa16.13■□□□□ 0.17
LINC00339-208ENST00000634934 ZNF215Q9UL58 517 aaPredicted RBP16.13■□□□□ 0.17
LINC00339-208ENST00000634934 E9PMD0 336 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 ZNF862O60290 1169 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 KPNA6O60684 536 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 MUTP22033 750 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 PSMC6P62333 389 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 NKX3-2P78367 333 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 FAM160A1Q05DH4 1040 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 KCNA10Q16322 511 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 C4orf19Q8IY42 314 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 IQUBQ8NA54 791 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 PCSK9Q8NBP7 692 aaKnown RBP16.12■□□□□ 0.17
LINC00339-208ENST00000634934 ARRDC4Q8NCT1 418 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 PIGOQ8TEQ8 1089 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 DIS3LQ8TF46 1054 aaKnown RBP16.12■□□□□ 0.17
LINC00339-208ENST00000634934 NACC1Q96RE7 527 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 PYM1Q9BRP8 204 aaKnown RBP16.12■□□□□ 0.17
LINC00339-208ENST00000634934 C16orf70Q9BSU1 422 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 ERAP1Q9NZ08 941 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 DNM3Q9UQ16 869 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 ZKSCAN5Q9Y2L8 839 aa16.12■□□□□ 0.17
LINC00339-208ENST00000634934 SYCE3A1L190 88 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 H3BRB1 525 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 ZBTB39O15060 712 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 NR1I2O75469 434 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 ZNF202O95125 648 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 LYPLA2O95372 231 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 ATP4AP20648 1035 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 CST5P28325 142 aaPredicted RBP16.11■□□□□ 0.17
LINC00339-208ENST00000634934 YWHABP31946 246 aaKnown RBP16.11■□□□□ 0.17
LINC00339-208ENST00000634934 PURAQ00577 322 aaKnown RBP16.11■□□□□ 0.17
LINC00339-208ENST00000634934 XKR3Q5GH77 459 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 CXCL17Q6UXB2 119 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 KCNK18Q7Z418 384 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 TUT1Q9H6E5 874 aaKnown RBP16.11■□□□□ 0.17
LINC00339-208ENST00000634934 SEPT9Q9UHD8 586 aaPredicted RBP16.11■□□□□ 0.17
LINC00339-208ENST00000634934 OGDHLQ9ULD0 1010 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 TRPC6Q9Y210 931 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 DNAH12Q6ZR08 3092 aa16.11■□□□□ 0.17
LINC00339-208ENST00000634934 TMEM150BA6NC51 233 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 OATP04181 439 aa16.1■□□□□ 0.17
LINC00339-208ENST00000634934 SSBP05455 408 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC00339-208ENST00000634934 ASGR1P07306 291 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms