RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 ITGB1P05556 798 aa7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 NBL1P41271 181 aa7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 UBE3AQ05086 875 aa7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 TRAF1Q13077 416 aa7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 HDAC1Q13547 482 aaPredicted RBP7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 NEDD9Q14511 834 aa7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 RTN4RL1Q86UN2 441 aaPredicted RBP7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 IQCA1Q86XH1 822 aa7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 STAG2Q8N3U4 1231 aa7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 GPKOWQ92917 476 aaPredicted RBP eCLIP7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 CRBNQ96SW2 442 aa7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 PHF7Q9BWX1 381 aaPredicted RBP7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 ZSWIM5Q9P217 1185 aa7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 CHD6Q8TD26 2715 aa7.84□□□□□ -1.15
SOX9-AS1-218ENST00000628742 FSCN2O14926 492 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 LINC01565O15544 149 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 FIBPO43427 364 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 CYTH3O43739 400 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 KDM4AO75164 1064 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 CFBP00751 764 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PARP1P09874 1014 aaKnown RBP7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 CCND2P30279 289 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 CTNNB1P35222 781 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 GTF2F1P35269 517 aaKnown RBP eCLIP7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 RRP1P56182 461 aaKnown RBP7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 TROAPQ12815 778 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 NMIQ13287 307 aaPredicted RBP7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 TSR1Q2NL82 804 aaKnown RBP7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PROX2Q3B8N5 592 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PCNX4Q63HM2 1172 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 TSHZ1Q6ZSZ6 1077 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 TEX2Q8IWB9 1127 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 VN1R2Q8NFZ6 395 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 UIMC1Q96RL1 719 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 CDCA3Q99618 268 aaPredicted RBP7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 DSCC1Q9BVC3 393 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 FTHL17Q9BXU8 183 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 S1PR5Q9H228 398 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 SETD4Q9NVD3 440 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 MTMR7Q9Y216 660 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PCDHA1Q9Y5I3 950 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 MRPL42Q9Y6G3 142 aaKnown RBP7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 CFAP47Q6ZTR5 3102 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 ACACBO00763 2458 aa7.83□□□□□ -1.16
SOX9-AS1-218ENST00000628742 IGSF9BQ9UPX0 1349 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 TPRP12270 2363 aaKnown RBP7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 BHMG1C9JSJ3 638 aaPredicted RBP7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 KLRF2D3W0D1 207 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 KCNA2P16389 499 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 SMARCA1P28370 1054 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 AVPR2P30518 371 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 MFAP1P55081 439 aaKnown RBP7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 HAND2P61296 217 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PTPN21Q16825 1174 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 GNPTABQ3T906 1256 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 RRP12Q5JTH9 1297 aaKnown RBP7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PDE12Q6L8Q7 609 aaKnown RBP7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 RUFY4Q6ZNE9 571 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 ADGRD2Q7Z7M1 963 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 TRIM50Q86XT4 487 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 NPAS4Q8IUM7 802 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 GIMAP8Q8ND71 665 aaPredicted RBP7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PBXIP1Q96AQ6 731 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 MAP3K14Q99558 947 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 KAT14Q9H8E8 782 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 AGO3Q9H9G7 860 aaKnown RBP7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 ZNF215Q9UL58 517 aaPredicted RBP7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 LZTS1Q9Y250 596 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 USP15Q9Y4E8 981 aaPredicted RBP7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 TELO2Q9Y4R8 837 aa7.82□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PNMA6FA0A0J9YX94 578 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 GSTTP1A0A1W2PQM5 241 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 GCOM1H8Y6P7 765 aaPredicted RBP7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 MEIS2O14770 477 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 ZNF213O14771 459 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 UPP2O95045 317 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 CTSHP09668 335 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 POLR2MP0CAP2 368 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 SDSP20132 328 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 HOXA13P31271 388 aaPredicted RBP7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 VCPP55072 806 aaKnown RBP7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 FAM189BP81408 668 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 BTG3Q14201 252 aaPredicted RBP7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 GRM4Q14833 912 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 DUSP6Q16828 381 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 ERMP1Q7Z2K6 904 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 SMC5Q8IY18 1101 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 KLHL23Q8NBE8 558 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PPP2R3CQ969Q6 453 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 GPRASP2Q96D09 838 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 ZKSCAN3Q9BRR0 538 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 KRT23Q9C075 422 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 CNNM2Q9H8M5 875 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 MLXIPQ9HAP2 919 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PLXNA4Q9HCM2 1894 aa7.81□□□□□ -1.16
SOX9-AS1-218ENST00000628742 CACNA1BQ00975 2339 aa7.8□□□□□ -1.16
SOX9-AS1-218ENST00000628742 LOXHD1Q8IVV2 1947 aa7.8□□□□□ -1.16
SOX9-AS1-218ENST00000628742 GPR179Q6PRD1 2367 aa7.8□□□□□ -1.16
SOX9-AS1-218ENST00000628742 PRR23AA6NEV1 266 aa7.8□□□□□ -1.16
SOX9-AS1-218ENST00000628742 B4E1Z4 1266 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms