RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 PTGISQ16647 500 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 ZNF484Q5JVG2 852 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 PRPF38BQ5VTL8 546 aaKnown RBP9.04□□□□□ -0.96
CHD2-213ENST00000628118 ARL6IP4Q66PJ3 421 aaKnown RBP9.04□□□□□ -0.96
CHD2-213ENST00000628118 SWSAP1Q6NVH7 229 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 TAF2Q6P1X5 1199 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 FAM43BQ6ZT52 329 aaPredicted RBP9.04□□□□□ -0.96
CHD2-213ENST00000628118 RPAINQ86UA6 219 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 CCDC60Q8IWA6 550 aaPredicted RBP9.04□□□□□ -0.96
CHD2-213ENST00000628118 ZNF710Q8N1W2 664 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 ATP8B4Q8TF62 1192 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 TTC12Q9H892 705 aaPredicted RBP9.04□□□□□ -0.96
CHD2-213ENST00000628118 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.04□□□□□ -0.96
CHD2-213ENST00000628118 NRBP2Q9NSY0 501 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 GABBR1Q9UBS5 961 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 VAV3Q9UKW4 847 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 TBX21Q9UL17 535 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 MTMR6Q9Y217 621 aa9.04□□□□□ -0.96
CHD2-213ENST00000628118 MORC2Q9Y6X9 1032 aaPredicted RBP9.04□□□□□ -0.96
CHD2-213ENST00000628118 MKI67P46013 3256 aaKnown RBP9.04□□□□□ -0.96
CHD2-213ENST00000628118 WDR81Q562E7 1941 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 POTEB3A0JP26 581 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 MBLAC1A4D2B0 266 aaPredicted RBP9.03□□□□□ -0.96
CHD2-213ENST00000628118 MAGEB2O15479 319 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 SLC26A4O43511 780 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 CHMP2AO43633 222 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 TIMP1P01033 207 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 RAG1P15918 1043 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 RFC2P35250 354 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 TXKP42681 527 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 QARSP47897 775 aaKnown RBP9.03□□□□□ -0.96
CHD2-213ENST00000628118 TOB1P50616 345 aaPredicted RBP9.03□□□□□ -0.96
CHD2-213ENST00000628118 ADAM17P78536 824 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 ATP2C1P98194 919 aaPredicted RBP9.03□□□□□ -0.96
CHD2-213ENST00000628118 SPIRE1Q08AE8 756 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 RESTQ13127 1097 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 PDIA5Q14554 519 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 PLCB4Q15147 1175 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 XKR3Q5GH77 459 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 HAUS3Q68CZ6 603 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 ATL3Q6DD88 541 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 GDF6Q6KF10 455 aaPredicted RBP9.03□□□□□ -0.96
CHD2-213ENST00000628118 POTEBQ6S5H4 581 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 TRIM50Q86XT4 487 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 C4orf19Q8IY42 314 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 EXOC8Q8IYI6 725 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 TMEM199Q8N511 208 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 KCTD17Q8N5Z5 321 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 RETREG2Q8NC44 543 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 ERMNQ8TAM6 284 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 LBHD1Q9BQE6 289 aaPredicted RBP9.03□□□□□ -0.96
CHD2-213ENST00000628118 TMEM60Q9H2L4 133 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 RNPEPQ9H4A4 650 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 ZSWIM4Q9H7M6 989 aa9.03□□□□□ -0.96
CHD2-213ENST00000628118 PRDM5Q9NQX1 630 aaPredicted RBP9.03□□□□□ -0.96
CHD2-213ENST00000628118 WNT7AO00755 349 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 LYPLA2O95372 231 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 OATP04181 439 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 PFKMP08237 780 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 XRCC6P12956 609 aaKnown RBP eCLIP9.02□□□□□ -0.97
CHD2-213ENST00000628118 INSRRP14616 1297 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 MARK3P27448 753 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 BMP8BP34820 402 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 CHMP4BP1P59074 171 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 PTGDRQ13258 359 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 GRIK4Q16099 956 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 NCAPH2Q6IBW4 605 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 MFSD5Q6N075 450 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 DTHD1Q6ZMT9 781 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 OTUD6AQ7L8S5 288 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 RSPH3Q86UC2 560 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 SERINC5Q86VE9 423 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 CKAP2LQ8IYA6 745 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 NME8Q8N427 588 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 C4orf32Q8N8J7 132 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 LMBR1Q8WVP7 490 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 JPH2Q9BR39 696 aaPredicted RBP9.02□□□□□ -0.97
CHD2-213ENST00000628118 NOC4LQ9BVI4 516 aaKnown RBP9.02□□□□□ -0.97
CHD2-213ENST00000628118 NIFKQ9BYG3 293 aaKnown RBP9.02□□□□□ -0.97
CHD2-213ENST00000628118 TRPV6Q9H1D0 765 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 HIPK3Q9H422 1215 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 TUFT1Q9NNX1 390 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 TRMT13Q9NUP7 481 aaKnown RBP9.02□□□□□ -0.97
CHD2-213ENST00000628118 TELO2Q9Y4R8 837 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 PCDHB6Q9Y5E3 794 aa9.02□□□□□ -0.97
CHD2-213ENST00000628118 TRIP12Q14669 1992 aaPredicted RBP9.02□□□□□ -0.97
CHD2-213ENST00000628118 SMIM35A0A1B0GVV1 85 aa9.01□□□□□ -0.97
CHD2-213ENST00000628118 A0A1W2PPC1 479 aa9.01□□□□□ -0.97
CHD2-213ENST00000628118 TRIM43BA6NCK2 446 aa9.01□□□□□ -0.97
CHD2-213ENST00000628118 H0YGN5 161 aa9.01□□□□□ -0.97
CHD2-213ENST00000628118 EML1O00423 815 aa9.01□□□□□ -0.97
CHD2-213ENST00000628118 ZSCAN22P10073 491 aaPredicted RBP9.01□□□□□ -0.97
CHD2-213ENST00000628118 ATP4AP20648 1035 aa9.01□□□□□ -0.97
CHD2-213ENST00000628118 ANP32AP39687 249 aaKnown RBP9.01□□□□□ -0.97
CHD2-213ENST00000628118 CDC42EP1Q00587 391 aa9.01□□□□□ -0.97
CHD2-213ENST00000628118 PRKCEQ02156 737 aa9.01□□□□□ -0.97
CHD2-213ENST00000628118 PPIGQ13427 754 aaKnown RBP eCLIP9.01□□□□□ -0.974e-7■■□□□ 12.1
CHD2-213ENST00000628118 RPUSD2Q8IZ73 545 aaKnown RBP9.01□□□□□ -0.97
CHD2-213ENST00000628118 GJA10Q969M2 543 aa9.01□□□□□ -0.97
CHD2-213ENST00000628118 TRIM43Q96BQ3 446 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms