RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ST18O60284 1047 aa16.85■□□□□ 0.29
PNKP-218ENST00000625299 SIGLEC14Q08ET2 396 aa16.85■□□□□ 0.29
PNKP-218ENST00000625299 TMEM266Q2M3C6 531 aa16.85■□□□□ 0.29
PNKP-218ENST00000625299 NCOA7Q8NI08 942 aa16.85■□□□□ 0.29
PNKP-218ENST00000625299 TRAPPC12Q8WVT3 735 aa16.85■□□□□ 0.29
PNKP-218ENST00000625299 AZI2Q9H6S1 392 aa16.85■□□□□ 0.29
PNKP-218ENST00000625299 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
PNKP-218ENST00000625299 E7EWF7 191 aa16.84■□□□□ 0.29
PNKP-218ENST00000625299 GFRA3O60609 400 aa16.84■□□□□ 0.29
PNKP-218ENST00000625299 RPLP2P05387 115 aaKnown RBP16.84■□□□□ 0.29
PNKP-218ENST00000625299 VCPP55072 806 aaKnown RBP16.84■□□□□ 0.29
PNKP-218ENST00000625299 NFX1Q12986 1120 aaKnown RBP16.84■□□□□ 0.29
PNKP-218ENST00000625299 CBX2Q14781 532 aaPredicted RBP16.84■□□□□ 0.29
PNKP-218ENST00000625299 UBE2SQ16763 222 aa16.84■□□□□ 0.29
PNKP-218ENST00000625299 CRIPAKQ8N1N5 446 aa16.84■□□□□ 0.29
PNKP-218ENST00000625299 JPH1Q9HDC5 661 aaPredicted RBP16.84■□□□□ 0.29
PNKP-218ENST00000625299 TLR9Q9NR96 1032 aa16.84■□□□□ 0.29
PNKP-218ENST00000625299 GINS2Q9Y248 185 aa16.84■□□□□ 0.29
PNKP-218ENST00000625299 PCDHB12Q9Y5F1 795 aa16.84■□□□□ 0.29
PNKP-218ENST00000625299 IGHDP01880 384 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 SP100P23497 879 aaPredicted RBP16.83■□□□□ 0.28
PNKP-218ENST00000625299 KIF5BP33176 963 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 PTH1RQ03431 593 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 FNDC1Q4ZHG4 1894 aaPredicted RBP16.83■□□□□ 0.28
PNKP-218ENST00000625299 ZBTB33Q86T24 672 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 ZNF654Q8IZM8 581 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 VN1R2Q8NFZ6 395 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 ATOH1Q92858 354 aaPredicted RBP16.83■□□□□ 0.28
PNKP-218ENST00000625299 NEK1Q96PY6 1258 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 PCYT2Q99447 389 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 SPZ1Q9BXG8 430 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 CELF4Q9BZC1 486 aaKnown RBP16.83■□□□□ 0.28
PNKP-218ENST00000625299 TMX1Q9H3N1 280 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 PSTPIP2Q9H939 334 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 IGSF9BQ9UPX0 1349 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 PCDHB7Q9Y5E2 793 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 SQORQ9Y6N5 450 aa16.83■□□□□ 0.28
PNKP-218ENST00000625299 SPDYE3A6NKU9 549 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 TBKBP1A7MCY6 615 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 PLEKHA8P1O95397 391 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 SARSP49591 514 aaKnown RBP16.82■□□□□ 0.28
PNKP-218ENST00000625299 ANTXR2P58335 489 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 KRT76Q01546 638 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 PLCB4Q15147 1175 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 THNSL1Q8IYQ7 743 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 CMTR1Q8N1G2 835 aaKnown RBP16.82■□□□□ 0.28
PNKP-218ENST00000625299 APOL5Q9BWW9 433 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 JADE2Q9NQC1 790 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 AAASQ9NRG9 546 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 HCSTQ9UBK5 93 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 SLC9A2Q9UBY0 812 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 PCDHA2Q9Y5H9 948 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 UBIAD1Q9Y5Z9 338 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 CFAP54Q96N23 3096 aa16.82■□□□□ 0.28
PNKP-218ENST00000625299 hCG_1642624A0A1W2PR95 340 aa16.81■□□□□ 0.28
PNKP-218ENST00000625299 FGF18O76093 207 aa16.81■□□□□ 0.28
PNKP-218ENST00000625299 DDAH1O94760 285 aa16.81■□□□□ 0.28
PNKP-218ENST00000625299 UBE3AQ05086 875 aa16.81■□□□□ 0.28
PNKP-218ENST00000625299 PTPN21Q16825 1174 aa16.81■□□□□ 0.28
PNKP-218ENST00000625299 DUSP6Q16828 381 aa16.81■□□□□ 0.28
PNKP-218ENST00000625299 PLPP4Q5VZY2 271 aa16.81■□□□□ 0.28
PNKP-218ENST00000625299 IGDCC4Q8TDY8 1250 aa16.81■□□□□ 0.28
PNKP-218ENST00000625299 TNPO1Q92973 898 aaKnown RBP16.81■□□□□ 0.28
PNKP-218ENST00000625299 ASIC4Q96FT7 647 aa16.81■□□□□ 0.28
PNKP-218ENST00000625299 TMEM260Q9NX78 707 aa16.81■□□□□ 0.28
PNKP-218ENST00000625299 DENND3A2RUS2 1198 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 MGEA5O60502 916 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 SRGAP2BP0DMP2 458 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 ATF7P17544 494 aaPredicted RBP16.8■□□□□ 0.28
PNKP-218ENST00000625299 RXRAP19793 462 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 AVPR2P30518 371 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 TECP42680 631 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 ERVFC1P60507 584 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 FAM102BQ5T8I3 360 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 LLGL2Q6P1M3 1020 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 NFXL1Q6ZNB6 911 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 SRBD1Q8N5C6 995 aaKnown RBP16.8■□□□□ 0.28
PNKP-218ENST00000625299 SUSD6Q92537 303 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 SDF4Q9BRK5 362 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 LY9Q9HBG7 655 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 PCDHA6Q9UN73 950 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 PCDHA8Q9Y5H6 950 aa16.8■□□□□ 0.28
PNKP-218ENST00000625299 ZFHX2Q9C0A1 2572 aaPredicted RBP16.8■□□□□ 0.28
PNKP-218ENST00000625299 CACNA1HO95180 2353 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 H0Y858 1186 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 RPS6KA5O75582 802 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 STAT5BP51692 787 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 ACTR2P61160 394 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 MTHFD1LQ6UB35 978 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 RAB11FIP4Q86YS3 637 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 MB21D2Q8IYB1 491 aaPredicted RBP16.79■□□□□ 0.28
PNKP-218ENST00000625299 CCDC82Q8N4S0 544 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 COLGALT1Q8NBJ5 622 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 ATP8B4Q8TF62 1192 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 RUFY2Q8WXA3 655 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 PPP1R16BQ96T49 567 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 MAP3K14Q99558 947 aa16.79■□□□□ 0.28
PNKP-218ENST00000625299 CDCA3Q99618 268 aaPredicted RBP16.79■□□□□ 0.28
PNKP-218ENST00000625299 ADAM2Q99965 735 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms