RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 STK24Q9Y6E0 443 aa17.7■□□□□ 0.42
CBWD3-216ENST00000621396 GSTTP1A0A1W2PQM5 241 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 ADCY6O43306 1168 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 CAVIN2O95810 425 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 VEGFBP49765 207 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 RARRES1P49788 294 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 SOX10P56693 466 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 C1orf186Q6ZWK4 172 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 SMAP1Q8IYB5 467 aaPredicted RBP17.69■□□□□ 0.42
CBWD3-216ENST00000621396 NFE2L3Q9Y4A8 694 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 ARHGEF35A5YM69 484 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 SLC15A5A6NIM6 579 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 USO1O60763 962 aaKnown RBP17.69■□□□□ 0.42
CBWD3-216ENST00000621396 ADCY5O95622 1261 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 PSAPP07602 524 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 TGFB3P10600 412 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 ATP4AP20648 1035 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 MARK3P27448 753 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 TCF7P36402 384 aaPredicted RBP17.69■□□□□ 0.42
CBWD3-216ENST00000621396 CASP5P51878 434 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 MYL5Q02045 173 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 MAP2K5Q13163 448 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 PTPN21Q16825 1174 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 DHX37Q8IY37 1157 aaKnown RBP17.69■□□□□ 0.42
CBWD3-216ENST00000621396 LENG1Q96BZ8 264 aaPredicted RBP17.69■□□□□ 0.42
CBWD3-216ENST00000621396 SPATA33Q96N06 139 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 PLXNA1Q9UIW2 1896 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 LRRC37A2A6NM11 1700 aa17.69■□□□□ 0.42
CBWD3-216ENST00000621396 MKI67P46013 3256 aaKnown RBP17.68■□□□□ 0.42
CBWD3-216ENST00000621396 SUPT20HL2P0C7V6 817 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 PSMC4P43686 418 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 NEDD9Q14511 834 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 XKR9Q5GH70 373 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 CELF3Q5SZQ8 465 aaKnown RBP17.68■□□□□ 0.42
CBWD3-216ENST00000621396 PADI6Q6TGC4 694 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 METTL7BQ6UX53 244 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 CREBRFQ8IUR6 639 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 NELFBQ8WX92 580 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 TRIM47Q96LD4 638 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 PCYT2Q99447 389 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 BPIFA3Q9BQP9 254 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 KATNBL1Q9H079 304 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 GPRC5CQ9NQ84 441 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 ZSWIM8A7E2V4 1837 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 IRX5P78411 483 aaPredicted RBP17.68■□□□□ 0.42
CBWD3-216ENST00000621396 TTLL4Q14679 1199 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 MIS18BP1Q6P0N0 1132 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 SFR1Q86XK3 245 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 ADSSL1Q8N142 457 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 GJD2Q9UKL4 321 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 GABRQQ9UN88 632 aa17.68■□□□□ 0.42
CBWD3-216ENST00000621396 PVALEFA0A1B0GWK0 134 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 NOP56O00567 594 aaKnown RBP17.67■□□□□ 0.42
CBWD3-216ENST00000621396 PRKCEQ02156 737 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 EHHADHQ08426 723 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 UVSSAQ2YD98 709 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 MAMDC4Q6UXC1 1216 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 C4orf19Q8IY42 314 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 NEK9Q8TD19 979 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 SCFD2Q8WU76 684 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 CCDC43Q96MW1 224 aaKnown RBP17.67■□□□□ 0.42
CBWD3-216ENST00000621396 LRRC27Q9C0I9 530 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 SEPT9Q9UHD8 586 aaPredicted RBP17.67■□□□□ 0.42
CBWD3-216ENST00000621396 SYNRGQ9UMZ2 1314 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 CNNM4Q6P4Q7 775 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 NELFCDQ8IXH7 590 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 TRIM5Q9C035 493 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 IKZF4Q9H2S9 585 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 ZNF302Q9NR11 478 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 DACH1Q9UI36 760 aa17.67■□□□□ 0.42
CBWD3-216ENST00000621396 SLC26A4O43511 780 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 STBD1O95210 358 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 PAK1Q13153 545 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 ACVR2BQ13705 512 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 CCDC144BQ3MJ40 725 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 FAM26FQ5R3K3 315 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 KSR1Q8IVT5 923 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 CCDC65Q8IXS2 484 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 ANP32BQ92688 251 aaKnown RBP17.66■□□□□ 0.42
CBWD3-216ENST00000621396 CCDC47Q96A33 483 aaKnown RBP17.66■□□□□ 0.42
CBWD3-216ENST00000621396 CEP170P1Q96L14 293 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 GPR20Q99678 358 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 RBAK-RBAKDNI3L0D1 243 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 ATG7O95352 703 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 LACTBP83111 547 aaPredicted RBP17.66■□□□□ 0.42
CBWD3-216ENST00000621396 KCNA1Q09470 495 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 ATP6V0A1Q93050 837 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 PCDHA2Q9Y5H9 948 aa17.66■□□□□ 0.42
CBWD3-216ENST00000621396 HIP1RO75146 1068 aa17.65■□□□□ 0.42
CBWD3-216ENST00000621396 SMPD1P17405 629 aa17.65■□□□□ 0.42
CBWD3-216ENST00000621396 MTERF2Q49AM1 385 aa17.65■□□□□ 0.42
CBWD3-216ENST00000621396 DAW1Q8N136 415 aa17.65■□□□□ 0.42
CBWD3-216ENST00000621396 MYCT1Q8N699 235 aa17.65■□□□□ 0.42
CBWD3-216ENST00000621396 PPP1R13LQ8WUF5 828 aa17.65■□□□□ 0.42
CBWD3-216ENST00000621396 SEPT1Q8WYJ6 367 aa17.65■□□□□ 0.42
CBWD3-216ENST00000621396 GLG1Q92896 1179 aa17.65■□□□□ 0.42
CBWD3-216ENST00000621396 SMTNL1A8MU46 457 aa17.64■□□□□ 0.42
CBWD3-216ENST00000621396 IKBKBO14920 756 aa17.64■□□□□ 0.42
CBWD3-216ENST00000621396 TBCAO75347 108 aaKnown RBP17.64■□□□□ 0.42
CBWD3-216ENST00000621396 ERCC5P28715 1186 aaPredicted RBP17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms