RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 CAVIN3Q969G5 261 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 ARAP3Q8WWN8 1544 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 MCF2LO15068 1137 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 TNNI1P19237 187 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 AARSP49588 968 aaKnown RBP eCLIP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 OCA2Q04671 838 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 KPNB1Q14974 876 aaKnown RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 NXNQ6DKJ4 435 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 THOC1Q96FV9 657 aaKnown RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 SNF8Q96H20 258 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 GDAQ9Y2T3 454 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 SNX24Q9Y343 169 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 TARBP1Q13395 1621 aaKnown RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 O00370 1275 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 DIAPH2O60879 1101 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 TJP3O95049 919 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 ARFIP2P53365 341 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 CYP4F22Q6NT55 531 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 PPP1R18Q6NYC8 613 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 YTHDF3Q7Z739 585 aaKnown RBP11.03□□□□□ -0.64
CUL4A-212ENST00000617546 ALKBH8Q96BT7 664 aaKnown RBP11.03□□□□□ -0.64
CUL4A-212ENST00000617546 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.03□□□□□ -0.64
CUL4A-212ENST00000617546 GPC4O75487 556 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 PDHA1P08559 390 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 PFKFB3Q16875 520 aaPredicted RBP11.03□□□□□ -0.64
CUL4A-212ENST00000617546 PAPD7Q5XG87 772 aaKnown RBP11.03□□□□□ -0.64
CUL4A-212ENST00000617546 GPIHBP1Q8IV16 184 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 PYROXD1Q8WU10 500 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 WDR11Q9BZH6 1224 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 PUS7LQ9H0K6 701 aaKnown RBP11.03□□□□□ -0.64
CUL4A-212ENST00000617546 IRAK4Q9NWZ3 460 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 QRICH2Q9H0J4 1663 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 KIAA1210Q9ULL0 1709 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 GRAMD1BQ3KR37 738 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 SWT1Q5T5J6 900 aaKnown RBP11.03□□□□□ -0.64
CUL4A-212ENST00000617546 RAD9BQ6WBX8 426 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 COL23A1Q86Y22 540 aaPredicted RBP11.03□□□□□ -0.64
CUL4A-212ENST00000617546 DNAJC9Q8WXX5 260 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 RFFLQ8WZ73 363 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 NVLO15381 856 aaKnown RBP11.03□□□□□ -0.64
CUL4A-212ENST00000617546 KCNQ3O43525 872 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 CPP00450 1065 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 A1BGP04217 495 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 MYBL1P10243 752 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 DPYDQ12882 1025 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 CHURC1Q8WUH1 139 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 ZIM3Q96PE6 472 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 TRIM33Q9UPN9 1127 aa11.03□□□□□ -0.64
CUL4A-212ENST00000617546 MRPL11Q9Y3B7 192 aaKnown RBP11.03□□□□□ -0.64
CUL4A-212ENST00000617546 C1orf146Q5VVC0 180 aa11.02□□□□□ -0.64
CUL4A-212ENST00000617546 TRMT1LQ7Z2T5 733 aaKnown RBP11.02□□□□□ -0.64
CUL4A-212ENST00000617546 MRGBPQ9NV56 204 aa11.02□□□□□ -0.64
CUL4A-212ENST00000617546 ZBTB21Q9ULJ3 1066 aa11.02□□□□□ -0.64
CUL4A-212ENST00000617546 APOBEC2Q9Y235 224 aaKnown RBP11.02□□□□□ -0.64
CUL4A-212ENST00000617546 TMEM2Q9UHN6 1383 aa11.02□□□□□ -0.64
CUL4A-212ENST00000617546 ARHGEF40Q8TER5 1519 aa11.02□□□□□ -0.64
CUL4A-212ENST00000617546 APOEP02649 317 aa11.02□□□□□ -0.64
CUL4A-212ENST00000617546 PDZD8Q8NEN9 1154 aa11.02□□□□□ -0.64
CUL4A-212ENST00000617546 FAM167BQ9BTA0 163 aa11.02□□□□□ -0.64
CUL4A-212ENST00000617546 ORC6Q9Y5N6 252 aa11.02□□□□□ -0.64
CUL4A-212ENST00000617546 MAGEA13PA6NCF6 341 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 H7C1W4 665 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 PLA2G4BP0C869 781 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 EEF1DP29692 281 aaKnown RBP11.02□□□□□ -0.65
CUL4A-212ENST00000617546 PDE1BQ01064 536 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 GFPT1Q06210 699 aaPredicted RBP11.02□□□□□ -0.65
CUL4A-212ENST00000617546 ART3Q13508 389 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 MTF1Q14872 753 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 NLRX1Q86UT6 975 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 TBCKQ8TEA7 893 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 ZNF526Q8TF50 670 aaPredicted RBP11.02□□□□□ -0.65
CUL4A-212ENST00000617546 MAML3Q96JK9 1138 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 NACC1Q96RE7 527 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 ABCB11O95342 1321 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 ATXN2Q99700 1313 aaKnown RBP11.02□□□□□ -0.65
CUL4A-212ENST00000617546 GLI2P10070 1586 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 KRT38O76015 456 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 FSBPO95073 299 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 ACSL3O95573 720 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 CD19P15391 556 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 CCDC124Q96CT7 223 aaKnown RBP11.02□□□□□ -0.65
CUL4A-212ENST00000617546 LY9Q9HBG7 655 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 INTUQ9ULD6 942 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 ABCA9Q8IUA7 1624 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 KRT1P04264 644 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 CHN1P15882 459 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 MRPS9P82933 396 aaKnown RBP11.02□□□□□ -0.65
CUL4A-212ENST00000617546 CYLC2Q14093 348 aaPredicted RBP11.02□□□□□ -0.65
CUL4A-212ENST00000617546 ADRM1Q16186 407 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 SLC18A3Q16572 532 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 RARS2Q5T160 578 aaKnown RBP11.02□□□□□ -0.65
CUL4A-212ENST00000617546 SESTD1Q86VW0 696 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 STRBPQ96SI9 672 aaKnown RBP11.02□□□□□ -0.65
CUL4A-212ENST00000617546 CCDC87Q9NVE4 849 aa11.02□□□□□ -0.65
CUL4A-212ENST00000617546 COPEO14579 308 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 COBLO75128 1261 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 ZRANB2O95218 330 aaKnown RBP eCLIP11.01□□□□□ -0.65
CUL4A-212ENST00000617546 HDLBPQ00341 1268 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms