RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ANKFY1Q9P2R3 1169 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 G3BP2Q9UN86 482 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 CHRNA3P32297 505 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 ARL4CP56559 192 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 CCDC124Q96CT7 223 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 APOBEC2Q9Y235 224 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 ATP10DQ9P241 1426 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 PVALEFA0A1B0GWK0 134 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 HSPA8P11142 646 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 KRT10P13645 584 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 POLGP54098 1239 aaPredicted RBP11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 SEMA3FQ13275 785 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 DNAAF3Q8N9W5 541 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 DPF2Q92785 391 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 ADPGKQ9BRR6 497 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 LRRC1Q9BTT6 524 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 NACA2Q9H009 215 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 MLXIPLQ9NP71 852 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 NDE1Q9NXR1 346 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 SNX12Q9UMY4 172 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 NUB1Q9Y5A7 615 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 MEIS1O00470 390 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 DYNLL1P63167 89 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 BYSLQ13895 437 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 RNF207Q6ZRF8 634 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 SH3GLB2Q9NR46 395 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 PNMA2Q9UL42 364 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 ZRANB2O95218 330 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 SRGAP2BP0DMP2 458 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 RANBP1P43487 201 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 NT5C2P49902 561 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 CCNI2Q6ZMN8 369 aaPredicted RBP11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 DNAJC12Q9UKB3 198 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 CAPN11Q9UMQ6 739 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 UNC13AQ9UPW8 1703 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 TJP3O95049 919 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 ARFIP2P53365 341 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 CORO7P57737 925 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 FSCBQ5H9T9 825 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 SHC4Q6S5L8 630 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 ANO5Q75V66 913 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 KCTD6Q8NC69 237 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 ZNF577Q9BSK1 485 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 CACYBPQ9HB71 228 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 CASP2P42575 452 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 SPOPLQ6IQ16 392 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 STRBPQ96SI9 672 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 EDEM3Q9BZQ6 932 aa11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLTCL1-209ENST00000617103 KRT38O76015 456 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 TTLL1O95922 423 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 DDIT3P35638 169 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 GPC5P78333 572 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 OCA2Q04671 838 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 ITKQ08881 620 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 RSPH3Q86UC2 560 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 ATP6V0A1Q93050 837 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 HOOK2Q96ED9 719 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 TTC1Q99614 292 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.582e-6■■■□□ 16.5
CLTCL1-209ENST00000617103 DCTN4Q9UJW0 460 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 RPAP1Q9BWH6 1393 aaPredicted RBP11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 PLEKHA8P1O95397 391 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 IRAK1P51617 712 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 RASGRP2Q7LDG7 609 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 METTL13Q8N6R0 699 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 CCNYQ8ND76 341 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 COA7Q96BR5 231 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 IL17RAQ96F46 866 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 CFAP36Q96G28 342 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 FAM161BQ96MY7 647 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 MED10Q9BTT4 135 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 SUGCTQ9HAC7 445 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 KMT5AQ9NQR1 393 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 ARL2BPQ9Y2Y0 163 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 ATP7AQ04656 1500 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 ATP2B4P23634 1241 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 LRRC14Q15048 493 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 KLHL38Q2WGJ6 581 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 SLC30A9Q6PML9 568 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 SH2D3CQ8N5H7 860 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 KRT82Q9NSB4 513 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 SLC4A7Q9Y6M7 1214 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 A0A1B0GTH6 734 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 HSPA4LO95757 839 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 MCF2P10911 925 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 PYGBP11216 843 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 ALCAMQ13740 583 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 TSGA10IPQ3SY00 556 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 TRMT10CQ7L0Y3 403 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 DGKHQ86XP1 1220 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 HACE1Q8IYU2 909 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 DEPDC1BQ8WUY9 529 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 PRPF31Q8WWY3 499 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 SMYD3Q9H7B4 428 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 NRBP2Q9NSY0 501 aa11.43□□□□□ -0.58
CLTCL1-209ENST00000617103 TTC37Q6PGP7 1564 aa11.42□□□□□ -0.58
CLTCL1-209ENST00000617103 EIF4E1BA6NMX2 242 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms