RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CLYBLQ8N0X4 340 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 BICC1Q9H694 974 aaKnown RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 NFU1Q9UMS0 254 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 MROH5Q6ZUA9 1318 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 PASKQ96RG2 1323 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 TADA2AO75478 443 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 CACNB2Q08289 660 aaPredicted RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 MRPL28Q13084 256 aaKnown RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 ICE2Q659A1 982 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 KIF2CQ99661 725 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 NCOA5Q9HCD5 579 aaKnown RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 MOCS2O96007 188 aaPredicted RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 MAPK4P31152 587 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 CYP27A1Q02318 531 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 DMC1Q14565 340 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 DEPDC1Q5TB30 811 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 TIGD7Q6NT04 549 aaPredicted RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 TTC8Q8TAM2 541 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 HSPH1Q92598 858 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 XAGE2Q96GT9 111 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 DDX56Q9NY93 547 aaKnown RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 CAB39Q9Y376 341 aaPredicted RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 TNRQ92752 1358 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 ZBED1O96006 694 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 GUCY2FP51841 1108 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 TP53BP2Q13625 1128 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 SHROOM1Q2M3G4 852 aaPredicted RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 TBC1D9Q6ZT07 1266 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 MIGA2Q7L4E1 593 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 SRLQ86TD4 932 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 UHMK1Q8TAS1 419 aaKnown RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 OSBPL6Q9BZF3 934 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 CCDC90BQ9GZT6 254 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 KLHL25Q9H0H3 589 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 TRPV6Q9H1D0 765 aa13.54□□□□□ -0.24
TCF4-248ENST00000616053 TROQ12816 1431 aaPredicted RBP13.54□□□□□ -0.24
TCF4-248ENST00000616053 SCYL3Q8IZE3 742 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
TCF4-248ENST00000616053 SERPINI1Q99574 410 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 WARS2Q9UGM6 360 aaKnown RBP13.53□□□□□ -0.24
TCF4-248ENST00000616053 ZNF157P51786 506 aaPredicted RBP13.53□□□□□ -0.24
TCF4-248ENST00000616053 ALDH18A1P54886 795 aaKnown RBP13.53□□□□□ -0.24
TCF4-248ENST00000616053 CUL4AQ13619 759 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
TCF4-248ENST00000616053 PYGBP11216 843 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 ZNF235Q14590 738 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 TRIM71Q2Q1W2 868 aaKnown RBP13.53□□□□□ -0.24
TCF4-248ENST00000616053 SPACA7Q96KW9 195 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 ENTPD7Q9NQZ7 604 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 PIM2Q9P1W9 311 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 KLHL3Q9UH77 587 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 TRAPPC3O43617 180 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 BTDP43251 543 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 PRR23CQ6ZRP0 262 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 ASAP3Q8TDY4 903 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 NFKBIZQ9BYH8 718 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 RNASEH1O60930 286 aaKnown RBP13.53□□□□□ -0.24
TCF4-248ENST00000616053 NBNO60934 754 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 AARSP49588 968 aaKnown RBP eCLIP13.53□□□□□ -0.24
TCF4-248ENST00000616053 POTEDQ86YR6 584 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 SPATA2LQ8IUW3 424 aaPredicted RBP13.53□□□□□ -0.24
TCF4-248ENST00000616053 PHKBQ93100 1093 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 GJA10Q969M2 543 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 PCDHB9Q9Y5E1 797 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 PFDN1O60925 122 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 RALBP11234 206 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 MESDQ14696 234 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 GAS2L3Q86XJ1 694 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 FOXR1Q6PIV2 292 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 DBNDD1Q9H9R9 158 aa13.53□□□□□ -0.24
TCF4-248ENST00000616053 HIST1H2AGP0C0S8 130 aaPredicted RBP13.52□□□□□ -0.24
TCF4-248ENST00000616053 HIST1H2ADP20671 130 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 SLC16A1P53985 500 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 YWHAZP63104 245 aaKnown RBP13.52□□□□□ -0.24
TCF4-248ENST00000616053 TMEM132BQ14DG7 1078 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 HIST1H2AHQ96KK5 128 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 HIST1H2AJQ99878 128 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 H2AFJQ9BTM1 129 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 GTSE1Q9NYZ3 720 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 SNX5Q9Y5X3 404 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 LEMD2Q8NC56 503 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 TMX3Q96JJ7 454 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 EPN3Q9H201 632 aa13.52□□□□□ -0.24
TCF4-248ENST00000616053 GPAA1O43292 621 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 CAPN1P07384 714 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 STAT2P52630 851 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 USP39Q53GS9 565 aaKnown RBP13.52□□□□□ -0.25
TCF4-248ENST00000616053 BEST2Q8NFU1 509 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 FRMD6Q96NE9 622 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 BLZF1Q9H2G9 400 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 ZNF532Q9HCE3 1301 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 IRF1P10914 325 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 PRAMEP78395 509 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 CREB3L3Q68CJ9 461 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 DPH5Q9H2P9 285 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 PARVBQ9HBI1 364 aa13.52□□□□□ -0.25
TCF4-248ENST00000616053 FAM32AQ9Y421 112 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms