RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 DDX11L8A8MPP1 907 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 KIAA0355O15063 1070 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 ZNF862O60290 1169 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 RPLP2P05387 115 aaKnown RBP14.86□□□□□ -0.03
MDC1-209ENST00000613547 HOXC8P31273 242 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 CYP4A11Q02928 519 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 CEBPZQ03701 1054 aaKnown RBP14.86□□□□□ -0.03
MDC1-209ENST00000613547 BFSP2Q13515 415 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 KRT79Q5XKE5 535 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 OTUD6AQ7L8S5 288 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 C4orf19Q8IY42 314 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 IGSF22Q8N9C0 903 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 RETREG2Q8NC44 543 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 CAGE1Q8TC20 777 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 AK8Q96MA6 479 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 CCDC43Q96MW1 224 aaKnown RBP14.86□□□□□ -0.03
MDC1-209ENST00000613547 USP28Q96RU2 1077 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 HSD17B14Q9BPX1 270 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 LBHD1Q9BQE6 289 aaPredicted RBP14.86□□□□□ -0.03
MDC1-209ENST00000613547 HIPK3Q9H422 1215 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 TUFT1Q9NNX1 390 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 RGL1Q9NZL6 768 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 SEPT9Q9UHD8 586 aaPredicted RBP14.86□□□□□ -0.03
MDC1-209ENST00000613547 CFAP45Q9UL16 551 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 TBX21Q9UL17 535 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 CLIC4Q9Y696 253 aa14.86□□□□□ -0.03
MDC1-209ENST00000613547 DOCK5Q9H7D0 1870 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 SLITRK3O94933 977 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 CYP2C9P11712 490 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 SYN1P17600 705 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 ATP4AP20648 1035 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 LONP1P36776 959 aaKnown RBP14.85□□□□□ -0.03
MDC1-209ENST00000613547 CCT6AP40227 531 aaKnown RBP14.85□□□□□ -0.03
MDC1-209ENST00000613547 CTTNQ14247 550 aaKnown RBP14.85□□□□□ -0.03
MDC1-209ENST00000613547 SLC39A14Q15043 492 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 STK38Q15208 465 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 TAF2Q6P1X5 1199 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 RSPH3Q86UC2 560 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 SERINC5Q86VE9 423 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 SNX29Q8TEQ0 813 aa14.85□□□□□ -0.03
MDC1-209ENST00000613547 POLR3CQ9BUI4 534 aaPredicted RBP14.85□□□□□ -0.03
MDC1-209ENST00000613547 FTOQ9C0B1 505 aaKnown RBP eCLIP14.85□□□□□ -0.03
MDC1-209ENST00000613547 ZMYND8Q9ULU4 1186 aaPredicted RBP14.85□□□□□ -0.03
MDC1-209ENST00000613547 PITPNM1O00562 1244 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 MAGEB2O15479 319 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 TREHO43280 583 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 LYPLA2O95372 231 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 YEATS4O95619 227 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 MUTP22033 750 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 RPA1P27694 616 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 YWHABP31946 246 aaKnown RBP14.84□□□□□ -0.03
MDC1-209ENST00000613547 NASPP49321 788 aaPredicted RBP14.84□□□□□ -0.03
MDC1-209ENST00000613547 ZNF200P98182 395 aaPredicted RBP14.84□□□□□ -0.03
MDC1-209ENST00000613547 PTPAQ15257 358 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 FOXD4L6Q3SYB3 417 aaPredicted RBP14.84□□□□□ -0.03
MDC1-209ENST00000613547 FOXD4L3Q6VB84 417 aaPredicted RBP14.84□□□□□ -0.03
MDC1-209ENST00000613547 SH3RF1Q7Z6J0 888 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 CATSPER3Q86XQ3 398 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 EXOC8Q8IYI6 725 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 JPH2Q9BR39 696 aaPredicted RBP14.84□□□□□ -0.03
MDC1-209ENST00000613547 NOC4LQ9BVI4 516 aaKnown RBP14.84□□□□□ -0.03
MDC1-209ENST00000613547 PPP1R12CQ9BZL4 782 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 TFIP11Q9UBB9 837 aaKnown RBP14.84□□□□□ -0.03
MDC1-209ENST00000613547 RBM19Q9Y4C8 960 aaKnown RBP14.84□□□□□ -0.03
MDC1-209ENST00000613547 PPME1Q9Y570 386 aa14.84□□□□□ -0.03
MDC1-209ENST00000613547 MORC2Q9Y6X9 1032 aaPredicted RBP14.84□□□□□ -0.03
MDC1-209ENST00000613547 MBLAC1A4D2B0 266 aaPredicted RBP14.83□□□□□ -0.04
MDC1-209ENST00000613547 TRIM43BA6NCK2 446 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 CAND2O75155 1236 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 TIMP1P01033 207 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 NCLP19338 710 aaKnown RBP14.83□□□□□ -0.04
MDC1-209ENST00000613547 KLRC1P26715 233 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 ADAM17P78536 824 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 TBC1D8BQ0IIM8 1120 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 HIC1Q14526 733 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 IL17AQ16552 155 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 MTERF2Q49AM1 385 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 MARCH8Q5T0T0 291 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 MTHFD1LQ6UB35 978 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 ANO5Q75V66 913 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 TMEM199Q8N511 208 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 KCTD17Q8N5Z5 321 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 TRAPPC12Q8WVT3 735 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 TRIM43Q96BQ3 446 aaPredicted RBP14.83□□□□□ -0.04
MDC1-209ENST00000613547 CDK5RAP3Q96JB5 506 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 NACC1Q96RE7 527 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 NIFKQ9BYG3 293 aaKnown RBP14.83□□□□□ -0.04
MDC1-209ENST00000613547 TSHZ2Q9NRE2 1034 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 CIZ1Q9ULV3 898 aaPredicted RBP14.83□□□□□ -0.04
MDC1-209ENST00000613547 ZDHHC9Q9Y397 364 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 SRPRBQ9Y5M8 271 aaKnown RBP14.83□□□□□ -0.04
MDC1-209ENST00000613547 KDM3AQ9Y4C1 1321 aa14.83□□□□□ -0.04
MDC1-209ENST00000613547 SMIM35A0A1B0GVV1 85 aa14.82□□□□□ -0.04
MDC1-209ENST00000613547 H0YGN5 161 aa14.82□□□□□ -0.04
MDC1-209ENST00000613547 SPTLC2O15270 562 aa14.82□□□□□ -0.04
MDC1-209ENST00000613547 SLC26A4O43511 780 aa14.82□□□□□ -0.04
MDC1-209ENST00000613547 MED24O75448 989 aa14.82□□□□□ -0.04
MDC1-209ENST00000613547 SPATA31C1P0DKV0 1188 aa14.82□□□□□ -0.04
MDC1-209ENST00000613547 XRCC6P12956 609 aaKnown RBP eCLIP14.82□□□□□ -0.046e-7■□□□□ 8.7
MDC1-209ENST00000613547 SELPP16109 830 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms