RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 BBXQ8WY36 941 aaPredicted RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 ATP6V0A1Q93050 837 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 EIF2AK1Q9BQI3 630 aaKnown RBP6.95□□□□□ -1.3
SNX13-213ENST00000611725 DPH5Q9H2P9 285 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 FAM53CQ9NYF3 392 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 NFU1Q9UMS0 254 aa6.95□□□□□ -1.3
SNX13-213ENST00000611725 CCDC188H7C350 402 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 MSH4O15457 936 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 MED24O75448 989 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 MYZAPP0CAP1 466 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 SLC7A5Q01650 507 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 MTMR3Q13615 1198 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 WDR59Q6PJI9 974 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 COL23A1Q86Y22 540 aaPredicted RBP6.94□□□□□ -1.3
SNX13-213ENST00000611725 GSPT2Q8IYD1 628 aaKnown RBP6.94□□□□□ -1.3
SNX13-213ENST00000611725 FAM151AQ8WW52 585 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 KIFAP3Q92845 792 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 LRRC1Q9BTT6 524 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 VIPAS39Q9H9C1 493 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 PICK1Q9NRD5 415 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 KCNG1Q9UIX4 513 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 NPHP3-ACAD11A0A0J9YXS1 232 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 HARSP12081 509 aaKnown RBP6.94□□□□□ -1.3
SNX13-213ENST00000611725 PRELPP51888 382 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 WDR44Q5JSH3 913 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 INTS8Q75QN2 995 aaKnown RBP6.94□□□□□ -1.3
SNX13-213ENST00000611725 KCTD17Q8N5Z5 321 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 XXYLT1Q8NBI6 393 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 ACER1Q8TDN7 264 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 PRMT6Q96LA8 375 aaPredicted RBP6.94□□□□□ -1.3
SNX13-213ENST00000611725 GJA3Q9Y6H8 435 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 ROBO3Q96MS0 1386 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 EPHB6O15197 1021 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 ZNF185O15231 689 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 HERVK_113P62684 666 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 MYL7Q01449 175 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 DCAF15Q66K64 600 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 SYN2Q92777 582 aaPredicted RBP6.94□□□□□ -1.3
SNX13-213ENST00000611725 HAS1Q92839 578 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 CCDC77Q9BR77 488 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 PCIF1Q9H4Z3 704 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 ANKZF1Q9H8Y5 726 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 LMO7Q8WWI1 1683 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 ADAMTS3O15072 1205 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 SNHG28P0DPA3 235 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 BAG6P46379 1132 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 ATP1A2P50993 1020 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 GNPTABQ3T906 1256 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 FAM102BQ5T8I3 360 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 ZNF772Q68DY9 489 aaPredicted RBP6.94□□□□□ -1.3
SNX13-213ENST00000611725 CCDC105Q8IYK2 499 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 LXNQ9BS40 222 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 VCPKMTQ9H867 229 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 UTP11Q9Y3A2 253 aaKnown RBP6.94□□□□□ -1.3
SNX13-213ENST00000611725 ABL1P00519 1130 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 ACTN1P12814 892 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 GJC1P36383 396 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 PLCB3Q01970 1234 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 CCDC25Q86WR0 208 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 NEK9Q8TD19 979 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 SLC35C1Q96A29 364 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 CAPS2Q9BXY5 557 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 DDX47Q9H0S4 455 aaKnown RBP6.94□□□□□ -1.3
SNX13-213ENST00000611725 RAB17Q9H0T7 212 aa6.94□□□□□ -1.3
SNX13-213ENST00000611725 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.94□□□□□ -1.3
SNX13-213ENST00000611725 REXO2Q9Y3B8 237 aaKnown RBP6.94□□□□□ -1.3
SNX13-213ENST00000611725 SASH3O75995 380 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 GAS8O95995 478 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 P4HBP07237 508 aaKnown RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 DLATP10515 647 aaKnown RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 CTNNA2P26232 953 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 SREBF1P36956 1147 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 GRIPAP1Q4V328 841 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 SLC51AQ86UW1 340 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 ZFPM1Q8IX07 1006 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 HOOK2Q96ED9 719 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 SCLT1Q96NL6 688 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 NT5C1BQ96P26 610 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 ACCSQ96QU6 501 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 MKNK1Q9BUB5 465 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 ZNF341Q9BYN7 854 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 UBXN6Q9BZV1 441 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNX13-213ENST00000611725 TBC1D22BQ9NU19 505 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 AK9Q5TCS8 1911 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 KIF13AQ9H1H9 1805 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 GOLGA8KD6RF30 607 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 PPFIA4O75335 1185 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 FGGP02679 453 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 KRT5P13647 590 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 HNRNPH3P31942 346 aaKnown RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 GCLMP48507 274 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 PPP1R7Q15435 360 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 CLUL1Q15846 466 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 CPLX4Q7Z7G2 160 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 AMIGO3Q86WK7 504 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 MMGT1Q8N4V1 131 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 GLIS3Q8NEA6 775 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 GMCL1Q96IK5 515 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 PBKQ96KB5 322 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms