RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 UPF3BQ9BZI7 483 aaKnown RBP13.55□□□□□ -0.24
FDPS-220ENST00000611010 FAM49AQ9H0Q0 323 aaPredicted RBP13.55□□□□□ -0.24
FDPS-220ENST00000611010 LY9Q9HBG7 655 aa13.55□□□□□ -0.24
FDPS-220ENST00000611010 ERAP1Q9NZ08 941 aa13.55□□□□□ -0.24
FDPS-220ENST00000611010 USP15Q9Y4E8 981 aaPredicted RBP13.55□□□□□ -0.24
FDPS-220ENST00000611010 IGSF9BQ9UPX0 1349 aa13.55□□□□□ -0.24
FDPS-220ENST00000611010 INSRRP14616 1297 aa13.54□□□□□ -0.24
FDPS-220ENST00000611010 VCPP55072 806 aaKnown RBP13.54□□□□□ -0.24
FDPS-220ENST00000611010 ZXDAP98168 799 aa13.54□□□□□ -0.24
FDPS-220ENST00000611010 XRRA1Q6P2D8 792 aa13.54□□□□□ -0.24
FDPS-220ENST00000611010 RBM23Q86U06 439 aaKnown RBP13.54□□□□□ -0.24
FDPS-220ENST00000611010 ZNF654Q8IZM8 581 aa13.54□□□□□ -0.24
FDPS-220ENST00000611010 CMTR1Q8N1G2 835 aaKnown RBP13.54□□□□□ -0.24
FDPS-220ENST00000611010 SRBD1Q8N5C6 995 aaKnown RBP13.54□□□□□ -0.24
FDPS-220ENST00000611010 ASIC4Q96FT7 647 aa13.54□□□□□ -0.24
FDPS-220ENST00000611010 SNX27Q96L92 541 aa13.54□□□□□ -0.24
FDPS-220ENST00000611010 PADI3Q9ULW8 664 aa13.54□□□□□ -0.24
FDPS-220ENST00000611010 MYH9P35579 1960 aaKnown RBP13.54□□□□□ -0.24
FDPS-220ENST00000611010 VPS13AQ96RL7 3174 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 DCHS1Q96JQ0 3298 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 hCG_1642624A0A1W2PR95 340 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 SCG2P13521 617 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 TRAF1Q13077 416 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 TMEM266Q2M3C6 531 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 NLRX1Q86UT6 975 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 TMEM40Q8WWA1 233 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 SEPT1Q8WYJ6 367 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 SUSD6Q92537 303 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 TRPV2Q9Y5S1 764 aa13.53□□□□□ -0.24
FDPS-220ENST00000611010 RXRAP19793 462 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 MTMR1Q13613 665 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 KCNC3Q14003 757 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 PLCB4Q15147 1175 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 NAALADL2Q58DX5 795 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 TTC22Q5TAA0 569 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 RSPH3Q86UC2 560 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 GIMAP8Q8ND71 665 aaPredicted RBP13.52□□□□□ -0.25
FDPS-220ENST00000611010 NCOA7Q8NI08 942 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 CYP2W1Q8TAV3 490 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 ATP8B4Q8TF62 1192 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 GLG1Q92896 1179 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 PBXIP1Q96AQ6 731 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 ANP32EQ9BTT0 268 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 CDHR5Q9HBB8 845 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 CDH22Q9UJ99 828 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 SQORQ9Y6N5 450 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 KDM3AQ9Y4C1 1321 aa13.52□□□□□ -0.25
FDPS-220ENST00000611010 MYO10Q9HD67 2058 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 PER2O15055 1255 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 DDAH1O94760 285 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 PDGFBP01127 241 aaPredicted RBP13.51□□□□□ -0.25
FDPS-220ENST00000611010 CHMLP26374 656 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 ERVFC1P60507 584 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 TRDNQ13061 729 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 ITGB3BPQ13352 177 aaPredicted RBP13.51□□□□□ -0.25
FDPS-220ENST00000611010 TYW1BQ6NUM6 668 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 CATIPQ7Z7H3 387 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 RALYLQ86SE5 291 aaKnown RBP13.51□□□□□ -0.25
FDPS-220ENST00000611010 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 FBXL6Q8N531 539 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 RRP36Q96EU6 259 aaKnown RBP13.51□□□□□ -0.25
FDPS-220ENST00000611010 MAP3K14Q99558 947 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 PHF7Q9BWX1 381 aaPredicted RBP13.51□□□□□ -0.25
FDPS-220ENST00000611010 SMARCAD1Q9H4L7 1026 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 ERVK-5Q9HDB9 667 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 JADE2Q9NQC1 790 aa13.51□□□□□ -0.25
FDPS-220ENST00000611010 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
FDPS-220ENST00000611010 ERICH2A1L162 156 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 FSCN2O14926 492 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 PPFIA3O75145 1194 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 PTPN5P54829 565 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 PAK2Q13177 524 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 DUSP6Q16828 381 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 CUL5Q93034 780 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 RPGRIP1Q96KN7 1286 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 FTHL17Q9BXU8 183 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 CELF4Q9BZC1 486 aaKnown RBP13.5□□□□□ -0.25
FDPS-220ENST00000611010 JPH1Q9HDC5 661 aaPredicted RBP13.5□□□□□ -0.25
FDPS-220ENST00000611010 NOC2LQ9Y3T9 749 aaKnown RBP13.5□□□□□ -0.25
FDPS-220ENST00000611010 PCDHA2Q9Y5H9 948 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 C2orf16Q68DN1 1984 aa13.5□□□□□ -0.25
FDPS-220ENST00000611010 ZFHX2Q9C0A1 2572 aaPredicted RBP13.49□□□□□ -0.25
FDPS-220ENST00000611010 SPTBN4Q9H254 2564 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 RRN3P2A6NIE6 340 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 ZBTB42B2RXF5 422 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 SH2B2O14492 632 aaPredicted RBP13.49□□□□□ -0.25
FDPS-220ENST00000611010 SGSM2O43147 1006 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
FDPS-220ENST00000611010 CCNE2O96020 404 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 ARP10275 920 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 IBSPP21815 317 aaPredicted RBP13.49□□□□□ -0.25
FDPS-220ENST00000611010 SMARCA1P28370 1054 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 SARSP49591 514 aaKnown RBP13.49□□□□□ -0.25
FDPS-220ENST00000611010 ACTR2P61160 394 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 SIGLEC14Q08ET2 396 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 APOBRQ0VD83 1088 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 FAM102BQ5T8I3 360 aa13.49□□□□□ -0.25
FDPS-220ENST00000611010 IER5Q5VY09 327 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms