RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 PDLIM7Q9NR12 457 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 NRBP2Q9NSY0 501 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 TTC28Q96AY4 2481 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 IGSF9BQ9UPX0 1349 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 PRUNE2Q8WUY3 3088 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 EML1O00423 815 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 KIAA0355O15063 1070 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 RAG1P15918 1043 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 TECP42680 631 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 QARSP47897 775 aaKnown RBP16.02■□□□□ 0.16
CTSA-211ENST00000606066 PSMC5P62195 406 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 SPIRE1Q08AE8 756 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 DTHD1Q6ZMT9 781 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 CCDC155Q8N6L0 562 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 ERMNQ8TAM6 284 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 NEK9Q8TD19 979 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 BADQ92934 168 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 SETD4Q9NVD3 440 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 TBX21Q9UL17 535 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
CTSA-211ENST00000606066 TRIM43BA6NCK2 446 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 OATP04181 439 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 INSRRP14616 1297 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 HOXC8P31273 242 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
CTSA-211ENST00000606066 ATP2C1P98194 919 aaPredicted RBP16.01■□□□□ 0.15
CTSA-211ENST00000606066 PTK7Q13308 1070 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 BFSP2Q13515 415 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 PDIA5Q14554 519 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 GRIK4Q16099 956 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 ZNF484Q5JVG2 852 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 C9orf50Q5SZB4 431 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 ARL6IP4Q66PJ3 421 aaKnown RBP16.01■□□□□ 0.15
CTSA-211ENST00000606066 TRIM43Q96BQ3 446 aaPredicted RBP16.01■□□□□ 0.15
CTSA-211ENST00000606066 FAM161BQ96MY7 647 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 EYSQ5T1H1 3165 aa16.01■□□□□ 0.15
CTSA-211ENST00000606066 SCN10AQ9Y5Y9 1956 aa16■□□□□ 0.15
CTSA-211ENST00000606066 TIMP1P01033 207 aa16■□□□□ 0.15
CTSA-211ENST00000606066 CYP2C9P11712 490 aa16■□□□□ 0.15
CTSA-211ENST00000606066 ATP4AP20648 1035 aa16■□□□□ 0.15
CTSA-211ENST00000606066 PRKCEQ02156 737 aa16■□□□□ 0.15
CTSA-211ENST00000606066 SF3A1Q15459 793 aaKnown RBP16■□□□□ 0.15
CTSA-211ENST00000606066 XKR3Q5GH77 459 aa16■□□□□ 0.15
CTSA-211ENST00000606066 SH3RF1Q7Z6J0 888 aa16■□□□□ 0.15
CTSA-211ENST00000606066 RETREG2Q8NC44 543 aa16■□□□□ 0.15
CTSA-211ENST00000606066 BANK1Q8NDB2 785 aa16■□□□□ 0.15
CTSA-211ENST00000606066 CAGE1Q8TC20 777 aa16■□□□□ 0.15
CTSA-211ENST00000606066 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
CTSA-211ENST00000606066 ZNF396Q96N95 335 aaPredicted RBP16■□□□□ 0.15
CTSA-211ENST00000606066 EIF2AK1Q9BQI3 630 aaKnown RBP16■□□□□ 0.15
CTSA-211ENST00000606066 HIPK3Q9H422 1215 aa16■□□□□ 0.15
CTSA-211ENST00000606066 ZSWIM4Q9H7M6 989 aa16■□□□□ 0.15
CTSA-211ENST00000606066 LRWD1Q9UFC0 647 aa16■□□□□ 0.15
CTSA-211ENST00000606066 COL1A2P08123 1366 aa16■□□□□ 0.15
CTSA-211ENST00000606066 CDH23Q9H251 3354 aa16■□□□□ 0.15
CTSA-211ENST00000606066 TMEM265A0A087WTH1 108 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 POTEMA6NI47 508 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 TREHO43280 583 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 ZNF862O60290 1169 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 F13A1P00488 732 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 RPLP2P05387 115 aaKnown RBP15.99■□□□□ 0.15
CTSA-211ENST00000606066 IGBP1P78318 339 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 ADAM17P78536 824 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 ZNF200P98182 395 aaPredicted RBP15.99■□□□□ 0.15
CTSA-211ENST00000606066 UGCGQ16739 394 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 HAUS3Q68CZ6 603 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 TAF2Q6P1X5 1199 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 TRMT1LQ7Z2T5 733 aaKnown RBP15.99■□□□□ 0.15
CTSA-211ENST00000606066 SERINC5Q86VE9 423 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 C4orf19Q8IY42 314 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 DYDC2Q96IM9 177 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 HSD17B14Q9BPX1 270 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 LXNQ9BS40 222 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 TUBE1Q9UJT0 475 aa15.99■□□□□ 0.15
CTSA-211ENST00000606066 MBLAC1A4D2B0 266 aaPredicted RBP15.98■□□□□ 0.15
CTSA-211ENST00000606066 PITPNM1O00562 1244 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 SLITRK3O94933 977 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 CYP4A11Q02928 519 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 HIC1Q14526 733 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 FOXD4L5Q5VV16 416 aaPredicted RBP15.98■□□□□ 0.15
CTSA-211ENST00000606066 FAM173BQ6P4H8 233 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 OTUD6AQ7L8S5 288 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 RSPH3Q86UC2 560 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 TPH2Q8IWU9 490 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 TMEM199Q8N511 208 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 FOXD4L4Q8WXT5 416 aaPredicted RBP15.98■□□□□ 0.15
CTSA-211ENST00000606066 NOC4LQ9BVI4 516 aaKnown RBP15.98■□□□□ 0.15
CTSA-211ENST00000606066 NIFKQ9BYG3 293 aaKnown RBP15.98■□□□□ 0.15
CTSA-211ENST00000606066 PPP1R12CQ9BZL4 782 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 TTYH1Q9H313 450 aaPredicted RBP15.98■□□□□ 0.15
CTSA-211ENST00000606066 TUFT1Q9NNX1 390 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 RGL1Q9NZL6 768 aa15.98■□□□□ 0.15
CTSA-211ENST00000606066 SEPT9Q9UHD8 586 aaPredicted RBP15.98■□□□□ 0.15
CTSA-211ENST00000606066 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 DDX11L8A8MPP1 907 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 MAGEB2O15479 319 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 CAND2O75155 1236 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 LYPLA2O95372 231 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 BRD1O95696 1058 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 PKP1Q13835 747 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms