RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 COL4A3BPQ9Y5P4 624 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 LRP6O75581 1613 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 LINGO3P0C6S8 592 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 IGHMBP2P38935 993 aaKnown RBP16.79■□□□□ 0.28
RER1-209ENST00000605895 GRB10Q13322 594 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 MTMR3Q13615 1198 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 CDCA2Q69YH5 1023 aaPredicted RBP16.79■□□□□ 0.28
RER1-209ENST00000605895 PAIP2Q9BPZ3 127 aaKnown RBP16.79■□□□□ 0.28
RER1-209ENST00000605895 BAZ2AQ9UIF9 1905 aaKnown RBP16.79■□□□□ 0.28
RER1-209ENST00000605895 DISP2A7MBM2 1401 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 SPDYE5A6NIY4 337 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 SMIM24O75264 130 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 ERFP50548 548 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 LONRF1Q17RB8 773 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 ZNF384Q8TF68 577 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
RER1-209ENST00000605895 TSG101Q99816 390 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 UBA5Q9GZZ9 404 aa16.79■□□□□ 0.28
RER1-209ENST00000605895 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■■■■■ 90.8
RER1-209ENST00000605895 GHRP10912 638 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 PCK1P35558 622 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 CTCFP49711 727 aaPredicted RBP16.78■□□□□ 0.28
RER1-209ENST00000605895 PMS2P54278 862 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 CCDC26Q8TAB7 109 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 SNX29Q8TEQ0 813 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 ACSBG1Q96GR2 724 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 SLC5A4Q9NY91 659 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 TBK1Q9UHD2 729 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 MYH1P12882 1939 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 TMEM94Q12767 1356 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 GOLGB1Q14789 3259 aaKnown RBP16.78■□□□□ 0.28
RER1-209ENST00000605895 DPPA5A6NC42 116 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 SMCO2A6NFE2 343 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 MARCH6O60337 910 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 GH1P01241 217 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 CHRNDQ07001 517 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 LONP2Q86WA8 852 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 TMEM237Q96Q45 408 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 SH3GL3Q99963 347 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 PLA2G12BQ9BX93 195 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 ADAM33Q9BZ11 813 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 TMOD3Q9NYL9 352 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 CTNNAL1Q9UBT7 734 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 TDP2O95551 362 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 PLCG2P16885 1265 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 KIF5BP33176 963 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 RCAN1P53805 252 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 C11orf91Q3C1V1 193 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.78■□□□□ 0.28
RER1-209ENST00000605895 ADAM22Q9P0K1 906 aa16.78■□□□□ 0.28
RER1-209ENST00000605895 TJP1Q07157 1748 aa16.77■□□□□ 0.28
RER1-209ENST00000605895 ACSL3O95573 720 aa16.77■□□□□ 0.28
RER1-209ENST00000605895 ECM1Q16610 540 aa16.77■□□□□ 0.28
RER1-209ENST00000605895 TPCN2Q8NHX9 752 aa16.77■□□□□ 0.28
RER1-209ENST00000605895 C18orf8Q96DM3 657 aa16.77■□□□□ 0.28
RER1-209ENST00000605895 PNMA5Q96PV4 448 aa16.77■□□□□ 0.28
RER1-209ENST00000605895 G3BP2Q9UN86 482 aaKnown RBP16.77■□□□□ 0.28
RER1-209ENST00000605895 A0A1B0GVG6 124 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 PAEPP09466 180 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 GNAT1P11488 350 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 MSH2P43246 934 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 DR1Q01658 176 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 MROH5Q6ZUA9 1318 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 PIGWQ7Z7B1 504 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 MYOCDQ8IZQ8 938 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 FITM2Q8N6M3 262 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 TLCD1Q96CP7 247 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 RMDN2Q96LZ7 410 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 EPB41L4BQ9H329 900 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 AJAP1Q9UKB5 411 aaPredicted RBP16.77■□□□□ 0.27
RER1-209ENST00000605895 PPP1R9AQ9ULJ8 1098 aa16.77■□□□□ 0.27
RER1-209ENST00000605895 SLC37A4O43826 429 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 ATP2A2P16615 1042 aaKnown RBP16.76■□□□□ 0.27
RER1-209ENST00000605895 KLRK1P26718 216 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 USP17L2Q6R6M4 530 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 NEK9Q8TD19 979 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 SH3RF3Q8TEJ3 882 aaPredicted RBP16.76■□□□□ 0.27
RER1-209ENST00000605895 ATP8B4Q8TF62 1192 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 IKZF4Q9H2S9 585 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 BCAS3Q9H6U6 928 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 ETNK1Q9HBU6 452 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 IL17RBQ9NRM6 502 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 TFCP2L1Q9NZI6 479 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 NAGPAQ9UK23 515 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 SLIT3O75094 1523 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 GFPT2O94808 682 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 KCNH2Q12809 1159 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 UNC13DQ70J99 1090 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 DDX23Q9BUQ8 820 aaKnown RBP16.76■□□□□ 0.27
RER1-209ENST00000605895 CNOT10Q9H9A5 744 aaKnown RBP16.76■□□□□ 0.27
RER1-209ENST00000605895 DAAM1Q9Y4D1 1078 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 KIF13AQ9H1H9 1805 aa16.76■□□□□ 0.27
RER1-209ENST00000605895 RBAK-RBAKDNI3L0D1 243 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 KCNJ1P48048 391 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 FKBP3Q00688 224 aaKnown RBP16.75■□□□□ 0.27
RER1-209ENST00000605895 ADAM9Q13443 819 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 SUSD4Q5VX71 490 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 HOOK3Q86VS8 718 aa16.75■□□□□ 0.27
RER1-209ENST00000605895 C1orf131Q8NDD1 294 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms