RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 HBP1O60381 514 aa21.97■■□□□ 1.11
SHKBP1-221ENST00000599833 ZNF618Q5T7W0 954 aa21.97■■□□□ 1.11
SHKBP1-221ENST00000599833 UBE2OQ9C0C9 1292 aaKnown RBP21.97■■□□□ 1.11
SHKBP1-221ENST00000599833 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.97■■□□□ 1.11
SHKBP1-221ENST00000599833 NOD1Q9Y239 953 aa21.97■■□□□ 1.11
SHKBP1-221ENST00000599833 SAMM50Q9Y512 469 aa21.97■■□□□ 1.11
SHKBP1-221ENST00000599833 ARID2Q68CP9 1835 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 CHD7Q9P2D1 2997 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 A0A1W2PPC1 479 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 PRKCEQ02156 737 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 BFSP2Q13515 415 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 SHHQ15465 462 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 TARBP2Q15633 366 aaKnown RBP21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 TCTN1Q2MV58 587 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 TMEM240Q5SV17 173 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 RASIP1Q5U651 963 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 HSCBQ8IWL3 235 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 TMEM199Q8N511 208 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 BBXQ8WY36 941 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 TTC12Q9H892 705 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 IL23AQ9NPF7 189 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 TUBE1Q9UJT0 475 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 TRPC6Q9Y210 931 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 MTMR6Q9Y217 621 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 COL1A2P08123 1366 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 LOXHD1Q8IVV2 1947 aa21.96■■□□□ 1.11
SHKBP1-221ENST00000599833 RRN3P2A6NIE6 340 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 H3BQV1 296 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 NBNO60934 754 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 GNAT1P11488 350 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 SELPP16109 830 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 MGAT3Q09327 533 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 EPHA7Q15375 998 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 HABP4Q5JVS0 413 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 FAM26DQ5JW98 314 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 MCTP1Q6DN14 999 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 LRRC8DQ7L1W4 858 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 TDHQ8IZJ6 230 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 LINC01465Q8N7H1 131 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 BANK1Q8NDB2 785 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 HSD17B14Q9BPX1 270 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 PTPRSQ13332 1948 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 MYH15Q9Y2K3 1946 aa21.95■■□□□ 1.1
SHKBP1-221ENST00000599833 TMEM150BA6NC51 233 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 C22orf31O95567 290 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 CXCL10P02778 98 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 OATP04181 439 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 ACRP10323 421 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 TXKP42681 527 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 IGBP1P78318 339 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 RESTQ13127 1097 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 PPIGQ13427 754 aaKnown RBP eCLIP21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 GNL2Q13823 731 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 IL17AQ16552 155 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 MTHFD1LQ6UB35 978 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 TCEAL9Q9UHQ7 104 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 NOL7Q9UMY1 257 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 PCDHA12Q9UN75 941 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 PCDHA2Q9Y5H9 948 aa21.94■■□□□ 1.1
SHKBP1-221ENST00000599833 POTEMA6NI47 508 aa21.93■■□□□ 1.1
SHKBP1-221ENST00000599833 CAND2O75155 1236 aa21.93■■□□□ 1.1
SHKBP1-221ENST00000599833 BAG4O95429 457 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-221ENST00000599833 OR52Z1P0C646 297 aa21.93■■□□□ 1.1
SHKBP1-221ENST00000599833 RILPL1Q5EBL4 403 aa21.93■■□□□ 1.1
SHKBP1-221ENST00000599833 ZNF484Q5JVG2 852 aa21.93■■□□□ 1.1
SHKBP1-221ENST00000599833 NCAPH2Q6IBW4 605 aa21.93■■□□□ 1.1
SHKBP1-221ENST00000599833 ANO5Q75V66 913 aa21.93■■□□□ 1.1
SHKBP1-221ENST00000599833 NIFKQ9BYG3 293 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-221ENST00000599833 RGL1Q9NZL6 768 aa21.93■■□□□ 1.1
SHKBP1-221ENST00000599833 SLITRK3O94933 977 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 CHRNA1P02708 482 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 PDCP20941 246 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 KLRC1P26715 233 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 RFC2P35250 354 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 THPOP40225 353 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 PSMC5P62195 406 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 PTGDRQ13258 359 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 MKRN4PQ13434 485 aaPredicted RBP21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 TAF2Q6P1X5 1199 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 ZNF365Q70YC5 407 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 CCDC155Q8N6L0 562 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 DYDC2Q96IM9 177 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 FAM167AQ96KS9 214 aa21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 EIF2AK1Q9BQI3 630 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-221ENST00000599833 SMIM35A0A1B0GVV1 85 aa21.91■■□□□ 1.1
SHKBP1-221ENST00000599833 VPS37CA5D8V6 355 aaPredicted RBP21.91■■□□□ 1.1
SHKBP1-221ENST00000599833 P4HBP07237 508 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-221ENST00000599833 QARSP47897 775 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-221ENST00000599833 FXR2P51116 673 aaKnown RBP eCLIP21.91■■□□□ 1.1
SHKBP1-221ENST00000599833 FERMT3Q86UX7 667 aa21.91■■□□□ 1.1
SHKBP1-221ENST00000599833 ZNF579Q8NAF0 562 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-221ENST00000599833 RETREG2Q8NC44 543 aa21.91■■□□□ 1.1
SHKBP1-221ENST00000599833 DNAJB3Q8WWF6 145 aa21.91■■□□□ 1.1
SHKBP1-221ENST00000599833 LXNQ9BS40 222 aa21.91■■□□□ 1.1
SHKBP1-221ENST00000599833 MICAL3Q7RTP6 2002 aa21.9■■□□□ 1.1
SHKBP1-221ENST00000599833 SOX1O00570 391 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-221ENST00000599833 SPATA31C1P0DKV0 1188 aa21.9■■□□□ 1.1
SHKBP1-221ENST00000599833 ATP2C1P98194 919 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-221ENST00000599833 LRIT3Q3SXY7 679 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms