RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.09■□□□□ 0.97
ARHGEF1-218ENST00000599589 TTI1O43156 1089 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 CTNND1O60716 968 aaKnown RBP21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 ERMARDQ5T6L9 678 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 DGKHQ86XP1 1220 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 CCDC197Q8NCU1 140 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 DDX12PQ92771 950 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 CUL5Q93034 780 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 DPH5Q9H2P9 285 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 SLC24A3Q9HC58 644 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 ARPP21Q9UBL0 812 aaPredicted RBP21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 STK17AQ9UEE5 414 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 PNMA2Q9UL42 364 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 TNRC6CQ9HCJ0 1690 aaKnown RBP21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 FKBP3Q00688 224 aaKnown RBP21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 PRR5LQ6MZQ0 368 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 CELF4Q9BZC1 486 aaKnown RBP21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 FAM129AQ9BZQ8 928 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 ZMYND12Q9H0C1 365 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 AIPL1Q9NZN9 384 aa21.08■□□□□ 0.97
ARHGEF1-218ENST00000599589 USP17L3A6NCW0 530 aa21.08■□□□□ 0.96
ARHGEF1-218ENST00000599589 USP17L4A6NCW7 530 aa21.08■□□□□ 0.96
ARHGEF1-218ENST00000599589 RTN2O75298 545 aa21.08■□□□□ 0.96
ARHGEF1-218ENST00000599589 USP17L8P0C7I0 530 aa21.08■□□□□ 0.96
ARHGEF1-218ENST00000599589 SATB1Q01826 763 aa21.08■□□□□ 0.96
ARHGEF1-218ENST00000599589 USP17L1Q7RTZ2 530 aa21.08■□□□□ 0.96
ARHGEF1-218ENST00000599589 MYOCDQ8IZQ8 938 aa21.08■□□□□ 0.96
ARHGEF1-218ENST00000599589 LRRC57Q8N9N7 239 aa21.08■□□□□ 0.96
ARHGEF1-218ENST00000599589 TBCKQ8TEA7 893 aa21.08■□□□□ 0.96
ARHGEF1-218ENST00000599589 CNOT10Q9H9A5 744 aaKnown RBP21.08■□□□□ 0.96
ARHGEF1-218ENST00000599589 SMCO2A6NFE2 343 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 BUB1BO60566 1050 aaPredicted RBP21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 PTK2Q05397 1052 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 PROM2Q8N271 834 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 WDR66Q8TBY9 1149 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 TCP11Q8WWU5 503 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 TLCD1Q96CP7 247 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 STAMBPL1Q96FJ0 436 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 TRIM6Q9C030 488 aaPredicted RBP21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 MCM9Q9NXL9 1143 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 KIAA1551Q9HCM1 1747 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 ZBTB48P10074 688 aaPredicted RBP21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 ZCWPW2Q504Y3 356 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 DZIP1Q86YF9 867 aaKnown RBP21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 RAD54LQ92698 747 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 DYNLL2Q96FJ2 89 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 ATP8A1Q9Y2Q0 1164 aa21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.07■□□□□ 0.96
ARHGEF1-218ENST00000599589 BTNL10A8MVZ5 291 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 CAND2O75155 1236 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 SLC27A3Q5K4L6 730 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 KCNK18Q7Z418 384 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 RPGRQ92834 1020 aaKnown RBP21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 RSRC1Q96IZ7 334 aaKnown RBP21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 NUDT12Q9BQG2 462 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 TRIM31Q9BZY9 425 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 POTEMA6NI47 508 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 CCDC188H7C350 402 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 CLTAP09496 248 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 GYS1P13807 737 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 CHN1P15882 459 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 SBK1Q52WX2 424 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 FMNL3Q8IVF7 1028 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 CCDC63Q8NA47 563 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 ZNF317Q96PQ6 595 aaPredicted RBP21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 QTRT2Q9H974 415 aaKnown RBP21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 TBC1D7Q9P0N9 293 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 BIN2Q9UBW5 565 aaPredicted RBP21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 JAG2Q9Y219 1238 aa21.06■□□□□ 0.96
ARHGEF1-218ENST00000599589 MYO1EQ12965 1108 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 LRCH2Q5VUJ6 765 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 ZNF571Q7Z3V5 609 aaPredicted RBP21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 ANKS4BQ8N8V4 417 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 GANQ9H2C0 597 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 SKAP2O75563 359 aaPredicted RBP21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 MMEP08473 750 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 PSMD2Q13200 908 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 CALCRLQ16602 461 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 PNMA8AQ86V59 439 aaPredicted RBP21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 DHX37Q8IY37 1157 aaKnown RBP21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 CCDC26Q8TAB7 109 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 NSMCE1Q8WV22 266 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 CENPTQ96BT3 561 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 SELENOSQ9BQE4 189 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 FGFBP2Q9BYJ0 223 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 C6orf50Q9HD87 102 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 SLC12A4Q9UP95 1085 aa21.05■□□□□ 0.96
ARHGEF1-218ENST00000599589 LDHBP07195 334 aaKnown RBP21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 COASYQ13057 564 aa21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 C15orf52Q6ZUT6 534 aaKnown RBP21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 ZNF804AQ7Z570 1209 aa21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 NELFCDQ8IXH7 590 aa21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 THOC1Q96FV9 657 aaKnown RBP21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 TRIM51Q9BSJ1 452 aa21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 SLITRK6Q9H5Y7 841 aa21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 TMEM260Q9NX78 707 aa21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 UTP11Q9Y3A2 253 aaKnown RBP21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 SERPINB2P05120 415 aa21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 ACTN1P12814 892 aa21.04■□□□□ 0.96
ARHGEF1-218ENST00000599589 IFI16Q16666 785 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms