RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 TEX2Q8IWB9 1127 aa18.78■□□□□ 0.6
CAPN12-208ENST00000597740 BLIDQ8IZY5 108 aa18.78■□□□□ 0.6
CAPN12-208ENST00000597740 SEPT8Q92599 483 aa18.78■□□□□ 0.6
CAPN12-208ENST00000597740 CUL5Q93034 780 aa18.78■□□□□ 0.6
CAPN12-208ENST00000597740 TOP1MTQ969P6 601 aa18.78■□□□□ 0.6
CAPN12-208ENST00000597740 MAF1Q9H063 256 aa18.78■□□□□ 0.6
CAPN12-208ENST00000597740 MUTYHQ9UIF7 546 aa18.78■□□□□ 0.6
CAPN12-208ENST00000597740 CIZ1Q9ULV3 898 aaPredicted RBP18.78■□□□□ 0.6
CAPN12-208ENST00000597740 KIAA1217Q5T5P2 1943 aa18.77■□□□□ 0.6
CAPN12-208ENST00000597740 VPS37CA5D8V6 355 aaPredicted RBP18.77■□□□□ 0.6
CAPN12-208ENST00000597740 M0R2N6 131 aa18.77■□□□□ 0.6
CAPN12-208ENST00000597740 MEIS2O14770 477 aa18.77■□□□□ 0.6
CAPN12-208ENST00000597740 PKP1Q13835 747 aa18.77■□□□□ 0.6
CAPN12-208ENST00000597740 SAFBQ15424 915 aaKnown RBP eCLIP18.77■□□□□ 0.6
CAPN12-208ENST00000597740 DIS3L2Q8IYB7 885 aaKnown RBP18.77■□□□□ 0.6
CAPN12-208ENST00000597740 SAMD3Q8N6K7 520 aa18.77■□□□□ 0.6
CAPN12-208ENST00000597740 BICD2Q8TD16 824 aa18.77■□□□□ 0.6
CAPN12-208ENST00000597740 PHOX2BQ99453 314 aa18.77■□□□□ 0.6
CAPN12-208ENST00000597740 IFIH1Q9BYX4 1025 aaKnown RBP18.77■□□□□ 0.6
CAPN12-208ENST00000597740 ZDHHC9Q9Y397 364 aa18.77■□□□□ 0.6
CAPN12-208ENST00000597740 WDFY4Q6ZS81 3184 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 BTBD18B2RXH4 712 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 PIK3CDO00329 1044 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 PPFIA4O75335 1185 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 BRD1O95696 1058 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 NR3C2P08235 984 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 CTSHP09668 335 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 KRT2P35908 639 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 LTBRP36941 435 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 CLK2P49760 499 aaKnown RBP18.76■□□□□ 0.59
CAPN12-208ENST00000597740 HSDL1Q3SXM5 330 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 OXER1Q8TDS5 423 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 ATP6V0A1Q93050 837 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 SPATA33Q96N06 139 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 OSBPL7Q9BZF2 842 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 PXMP2Q9NR77 195 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 MAP3K20Q9NYL2 800 aaKnown RBP18.76■□□□□ 0.59
CAPN12-208ENST00000597740 ZNF318Q5VUA4 2279 aa18.76■□□□□ 0.59
CAPN12-208ENST00000597740 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.75■□□□□ 0.59
CAPN12-208ENST00000597740 C17orf102A2RUQ5 167 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 GCOM1H8Y6P7 765 aaPredicted RBP18.75■□□□□ 0.59
CAPN12-208ENST00000597740 NCK2O43639 380 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 CFBP00751 764 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 POLR2MP0CAP2 368 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 ZSCAN22P10073 491 aaPredicted RBP18.75■□□□□ 0.59
CAPN12-208ENST00000597740 HOXD8P13378 290 aaPredicted RBP18.75■□□□□ 0.59
CAPN12-208ENST00000597740 U2AF2P26368 475 aaKnown RBP eCLIP18.75■□□□□ 0.59
CAPN12-208ENST00000597740 CTNNB1P35222 781 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 HSD17B4P51659 736 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 NUCB2P80303 420 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 DLX2Q07687 328 aaPredicted RBP18.75■□□□□ 0.59
CAPN12-208ENST00000597740 SMAD2Q15796 467 aaKnown RBP18.75■□□□□ 0.59
CAPN12-208ENST00000597740 MYSM1Q5VVJ2 828 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 USP17L6PQ6QN14 398 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 RNF135Q8IUD6 432 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 TNFRSF25Q93038 417 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 POP1Q99575 1024 aaKnown RBP18.75■□□□□ 0.59
CAPN12-208ENST00000597740 FOXP1Q9H334 677 aaPredicted RBP18.75■□□□□ 0.59
CAPN12-208ENST00000597740 BRMS1Q9HCU9 246 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 CHMP5Q9NZZ3 219 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 PCDHA6Q9UN73 950 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 PCDHA8Q9Y5H6 950 aa18.75■□□□□ 0.59
CAPN12-208ENST00000597740 COL4A6Q14031 1691 aa18.74■□□□□ 0.59
CAPN12-208ENST00000597740 MBTPS2O43462 519 aa18.74■□□□□ 0.59
CAPN12-208ENST00000597740 CSPG5O95196 566 aa18.74■□□□□ 0.59
CAPN12-208ENST00000597740 GGPS1O95749 300 aa18.74■□□□□ 0.59
CAPN12-208ENST00000597740 MYCLP12524 364 aaPredicted RBP18.74■□□□□ 0.59
CAPN12-208ENST00000597740 NR5A1Q13285 461 aa18.74■□□□□ 0.59
CAPN12-208ENST00000597740 UBE2SQ16763 222 aa18.74■□□□□ 0.59
CAPN12-208ENST00000597740 HERC4Q5GLZ8 1057 aaPredicted RBP18.74■□□□□ 0.59
CAPN12-208ENST00000597740 CELF3Q5SZQ8 465 aaKnown RBP18.74■□□□□ 0.59
CAPN12-208ENST00000597740 MCTP1Q6DN14 999 aa18.74■□□□□ 0.59
CAPN12-208ENST00000597740 REXO1Q8N1G1 1221 aaKnown RBP18.74■□□□□ 0.59
CAPN12-208ENST00000597740 C16orf70Q9BSU1 422 aa18.74■□□□□ 0.59
CAPN12-208ENST00000597740 TREHO43280 583 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 RGS20O76081 388 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 HOXA13P31271 388 aaPredicted RBP18.73■□□□□ 0.59
CAPN12-208ENST00000597740 HYAL1Q12794 435 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 RESTQ13127 1097 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 CTC1Q2NKJ3 1217 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 JAKMIP3Q5VZ66 844 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 MCTP2Q6DN12 878 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 FIBCD1Q8N539 461 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 PRSS33Q8NF86 280 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 RASGRP4Q8TDF6 673 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 TMEM260Q9NX78 707 aa18.73■□□□□ 0.59
CAPN12-208ENST00000597740 NLRC5Q86WI3 1866 aa18.72■□□□□ 0.59
CAPN12-208ENST00000597740 GRM6O15303 877 aa18.72■□□□□ 0.59
CAPN12-208ENST00000597740 F13A1P00488 732 aa18.72■□□□□ 0.59
CAPN12-208ENST00000597740 FOSP01100 380 aaPredicted RBP18.72■□□□□ 0.59
CAPN12-208ENST00000597740 SMIM10L2AP0DMW4 78 aa18.72■□□□□ 0.59
CAPN12-208ENST00000597740 SMIM10L2BP0DMW5 78 aa18.72■□□□□ 0.59
CAPN12-208ENST00000597740 FERMT3Q86UX7 667 aa18.72■□□□□ 0.59
CAPN12-208ENST00000597740 PDCD2LQ9BRP1 358 aa18.72■□□□□ 0.59
CAPN12-208ENST00000597740 ZSCAN16Q9H4T2 348 aaPredicted RBP18.72■□□□□ 0.59
CAPN12-208ENST00000597740 MYO7AQ13402 2215 aa18.72■□□□□ 0.59
CAPN12-208ENST00000597740 H3BRB1 525 aa18.71■□□□□ 0.59
CAPN12-208ENST00000597740 TBX10O75333 385 aa18.71■□□□□ 0.59
CAPN12-208ENST00000597740 UBA1P22314 1058 aaKnown RBP18.71■□□□□ 0.59
CAPN12-208ENST00000597740 AP3B2Q13367 1082 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms