RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ADAM17P78536 824 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 PRKCEQ02156 737 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 CYP4A11Q02928 519 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 GRIK4Q16099 956 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 FOXD4L6Q3SYB3 417 aaPredicted RBP21.67■■□□□ 1.06
PNKP-207ENST00000596014 FOXD4L3Q6VB84 417 aaPredicted RBP21.67■■□□□ 1.06
PNKP-207ENST00000596014 SH3RF1Q7Z6J0 888 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 FAM167AQ96KS9 214 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 ZNF396Q96N95 335 aaPredicted RBP21.67■■□□□ 1.06
PNKP-207ENST00000596014 RAB34Q9BZG1 259 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 PDLIM7Q9NR12 457 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 TMEM39AQ9NV64 488 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 TFIP11Q9UBB9 837 aaKnown RBP21.67■■□□□ 1.06
PNKP-207ENST00000596014 LRWD1Q9UFC0 647 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 NOD1Q9Y239 953 aa21.67■■□□□ 1.06
PNKP-207ENST00000596014 STBD1O95210 358 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 OATP04181 439 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 CTTNQ14247 550 aaKnown RBP21.66■■□□□ 1.06
PNKP-207ENST00000596014 LXNQ9BS40 222 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 PRDM5Q9NQX1 630 aaPredicted RBP21.66■■□□□ 1.06
PNKP-207ENST00000596014 NRBP2Q9NSY0 501 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 WRAP73Q9P2S5 460 aaPredicted RBP21.66■■□□□ 1.06
PNKP-207ENST00000596014 TBX21Q9UL17 535 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 VWA3AA6NCI4 1184 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 RRN3P2A6NIE6 340 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 TREHO43280 583 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 DKC1O60832 514 aaKnown RBP eCLIP21.66■■□□□ 1.06
PNKP-207ENST00000596014 CYP2C9P11712 490 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 IGBP1P78318 339 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 MARCH8Q5T0T0 291 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 TPH2Q8IWU9 490 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 ERMNQ8TAM6 284 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 NEK9Q8TD19 979 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 ZSWIM4Q9H7M6 989 aa21.66■■□□□ 1.06
PNKP-207ENST00000596014 TRIM43BA6NCK2 446 aa21.65■■□□□ 1.06
PNKP-207ENST00000596014 SPATA31C1P0DKV0 1188 aa21.65■■□□□ 1.06
PNKP-207ENST00000596014 NASPP49321 788 aaPredicted RBP21.65■■□□□ 1.06
PNKP-207ENST00000596014 NUCB2P80303 420 aa21.65■■□□□ 1.06
PNKP-207ENST00000596014 SLC39A14Q15043 492 aa21.65■■□□□ 1.06
PNKP-207ENST00000596014 XKR3Q5GH77 459 aa21.65■■□□□ 1.06
PNKP-207ENST00000596014 ZNF484Q5JVG2 852 aa21.65■■□□□ 1.06
PNKP-207ENST00000596014 C4orf19Q8IY42 314 aa21.65■■□□□ 1.06
PNKP-207ENST00000596014 TRAPPC12Q8WVT3 735 aa21.65■■□□□ 1.06
PNKP-207ENST00000596014 TRIM43Q96BQ3 446 aaPredicted RBP21.65■■□□□ 1.06
PNKP-207ENST00000596014 COL1A2P08123 1366 aa21.64■■□□□ 1.05
PNKP-207ENST00000596014 ZBTB42B2RXF5 422 aa21.64■■□□□ 1.05
PNKP-207ENST00000596014 KIAA0355O15063 1070 aa21.64■■□□□ 1.05
PNKP-207ENST00000596014 SERINC5Q86VE9 423 aa21.64■■□□□ 1.05
PNKP-207ENST00000596014 CATSPER3Q86XQ3 398 aa21.64■■□□□ 1.05
PNKP-207ENST00000596014 PRKAG2Q9UGJ0 569 aa21.64■■□□□ 1.05
PNKP-207ENST00000596014 EVPLQ92817 2033 aa21.64■■□□□ 1.05
PNKP-207ENST00000596014 SYN1P17600 705 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 MARCKSP29966 332 aaPredicted RBP21.63■■□□□ 1.05
PNKP-207ENST00000596014 ATL3Q6DD88 541 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 ANO5Q75V66 913 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 LINC00301Q8NCQ3 95 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 POLR3CQ9BUI4 534 aaPredicted RBP21.63■■□□□ 1.05
PNKP-207ENST00000596014 NIFKQ9BYG3 293 aaKnown RBP21.63■■□□□ 1.05
PNKP-207ENST00000596014 TUFT1Q9NNX1 390 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 TUBE1Q9UJT0 475 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 ZMYND8Q9ULU4 1186 aaPredicted RBP21.63■■□□□ 1.05
PNKP-207ENST00000596014 TCHHQ07283 1943 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 MBLAC1A4D2B0 266 aaPredicted RBP21.63■■□□□ 1.05
PNKP-207ENST00000596014 TMEM150BA6NC51 233 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 DDX11L8A8MPP1 907 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 PP2D1A8MPX8 630 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 MED24O75448 989 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 RPA1P27694 616 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 CDC25AP30304 524 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 DNM1Q05193 864 aaKnown RBP21.63■■□□□ 1.05
PNKP-207ENST00000596014 GRIN1Q05586 938 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 PTK7Q13308 1070 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 STK38Q15208 465 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 NOC4LQ9BVI4 516 aaKnown RBP21.63■■□□□ 1.05
PNKP-207ENST00000596014 SEPT9Q9UHD8 586 aaPredicted RBP21.63■■□□□ 1.05
PNKP-207ENST00000596014 STK24Q9Y6E0 443 aa21.63■■□□□ 1.05
PNKP-207ENST00000596014 MORC2Q9Y6X9 1032 aaPredicted RBP21.63■■□□□ 1.05
PNKP-207ENST00000596014 LYPLA2O95372 231 aa21.62■■□□□ 1.05
PNKP-207ENST00000596014 ITGB8P26012 769 aa21.62■■□□□ 1.05
PNKP-207ENST00000596014 KLRC1P26715 233 aa21.62■■□□□ 1.05
PNKP-207ENST00000596014 HAUS3Q68CZ6 603 aa21.62■■□□□ 1.05
PNKP-207ENST00000596014 DHX38Q92620 1227 aaKnown RBP21.62■■□□□ 1.05
PNKP-207ENST00000596014 WNT8BQ93098 351 aa21.62■■□□□ 1.05
PNKP-207ENST00000596014 ZBTB10Q96DT7 871 aa21.62■■□□□ 1.05
PNKP-207ENST00000596014 HIPK3Q9H422 1215 aa21.62■■□□□ 1.05
PNKP-207ENST00000596014 PCDH10Q9P2E7 1040 aa21.62■■□□□ 1.05
PNKP-207ENST00000596014 FBXO2Q9UK22 296 aaPredicted RBP21.62■■□□□ 1.05
PNKP-207ENST00000596014 CFAP45Q9UL16 551 aa21.62■■□□□ 1.05
PNKP-207ENST00000596014 ATP6V1DQ9Y5K8 247 aa21.62■■□□□ 1.05
PNKP-207ENST00000596014 SRPRBQ9Y5M8 271 aaKnown RBP21.62■■□□□ 1.05
PNKP-207ENST00000596014 H0YGN5 161 aa21.61■■□□□ 1.05
PNKP-207ENST00000596014 ZBTB39O15060 712 aa21.61■■□□□ 1.05
PNKP-207ENST00000596014 YWHABP31946 246 aaKnown RBP21.61■■□□□ 1.05
PNKP-207ENST00000596014 CCT6AP40227 531 aaKnown RBP21.61■■□□□ 1.05
PNKP-207ENST00000596014 TARBP2Q15633 366 aaKnown RBP21.61■■□□□ 1.05
PNKP-207ENST00000596014 KRT79Q5XKE5 535 aa21.61■■□□□ 1.05
PNKP-207ENST00000596014 MTHFD1LQ6UB35 978 aa21.61■■□□□ 1.05
PNKP-207ENST00000596014 SNX29Q8TEQ0 813 aa21.61■■□□□ 1.05
PNKP-207ENST00000596014 AK8Q96MA6 479 aa21.61■■□□□ 1.05
PNKP-207ENST00000596014 CHMP5Q9NZZ3 219 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms