RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PLCB1Q9NQ66 1216 aa18.21■□□□□ 0.51
PRKCSH-217ENST00000592741 ZHX1Q9UKY1 873 aaPredicted RBP18.21■□□□□ 0.51
PRKCSH-217ENST00000592741 ASTN1O14525 1302 aa18.21■□□□□ 0.51
PRKCSH-217ENST00000592741 MUTP22033 750 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 SETQ01105 290 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 APBA1Q02410 837 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 CASP8Q14790 479 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 EZH2Q15910 746 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 ZYXQ15942 572 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 ZNF572Q7Z3I7 529 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 CREG2Q8IUH2 290 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 PIGOQ8TEQ8 1089 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 OSBPL9Q96SU4 736 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 ACBD3Q9H3P7 528 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 ZNF277Q9NRM2 450 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 FEM1BQ9UK73 627 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 SMCHD1A6NHR9 2005 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 EIF3DO15371 548 aaKnown RBP eCLIP18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 SLITRK3O94933 977 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 NAP1L1P55209 391 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 C2orf54Q08AI8 447 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 SLC18A3Q16572 532 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 CEP55Q53EZ4 464 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 FAM133AQ8N9E0 248 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 WDR11Q9BZH6 1224 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 SUGCTQ9HAC7 445 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 PDE11AQ9HCR9 933 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 TSKSQ9UJT2 592 aa18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 ZBTB12Q9Y330 459 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-217ENST00000592741 UBXN2AP68543 259 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 ITIH3Q06033 890 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 EXOC3L4Q17RC7 722 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 DCAF17Q5H9S7 520 aaPredicted RBP18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 FAM83AQ86UY5 434 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 ANKRD13CQ8N6S4 541 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 ZNF577Q9BSK1 485 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 TMEM39BQ9GZU3 492 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 SALL4Q9UJQ4 1053 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 H3BQF6 201 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 BUB1O43683 1085 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 AKAP3O75969 853 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 CAP2P40123 477 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 ARID5AQ03989 594 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 NFRKBQ6P4R8 1299 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 C1orf186Q6ZWK4 172 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 MMGT1Q8N4V1 131 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 MYCT1Q8N699 235 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 COG1Q8WTW3 980 aa18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.19■□□□□ 0.5
PRKCSH-217ENST00000592741 RBBP6Q7Z6E9 1792 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 CCDC181Q5TID7 509 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 KLHDC7AQ5VTJ3 777 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 MIGA2Q7L4E1 593 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 LDHDQ86WU2 507 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 MTMR14Q8NCE2 650 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 SPAG5Q96R06 1193 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 NACC1Q96RE7 527 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 TEKT3Q9BXF9 490 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 PARVGQ9HBI0 331 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 ZCCHC17Q9NP64 241 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 COL4A5P29400 1685 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 UBE4BO95155 1302 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 FRMPD4Q14CM0 1322 aa18.18■□□□□ 0.5
PRKCSH-217ENST00000592741 ACTN1P12814 892 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 SLC9A1P19634 815 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 PON1P27169 355 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 NAB2Q15742 525 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 TCERG1LQ5VWI1 586 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 SLC30A10Q6XR72 485 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 GBP6Q6ZN66 633 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 AGBL3Q8NEM8 1001 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 CAMKK2Q96RR4 588 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 POLD4Q9HCU8 107 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 SEL1LQ9UBV2 794 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 BZW2Q9Y6E2 419 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 SFI1A8K8P3 1242 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 CLIC2O15247 247 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 UCHL3P15374 230 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 PAFAH1B1P43034 410 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 EPHA7Q15375 998 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 NFIL3Q16649 462 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 DPY19L2P1Q6NXN4 242 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 STXBP4Q6ZWJ1 553 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 CDAN1Q8IWY9 1227 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 NIM1KQ8IY84 436 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 RUBCNQ92622 972 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 VPS33BQ9H267 617 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 UNC45AQ9H3U1 944 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 KCND2Q9NZV8 630 aa18.17■□□□□ 0.5
PRKCSH-217ENST00000592741 A0A087X0T9 212 aa18.16■□□□□ 0.5
PRKCSH-217ENST00000592741 SHTN1A0MZ66 631 aa18.16■□□□□ 0.5
PRKCSH-217ENST00000592741 NCK2O43639 380 aa18.16■□□□□ 0.5
PRKCSH-217ENST00000592741 PPP1R12BO60237 982 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-217ENST00000592741 ASNSP08243 561 aa18.16■□□□□ 0.5
PRKCSH-217ENST00000592741 FAM228BP0C875 321 aa18.16■□□□□ 0.5
PRKCSH-217ENST00000592741 CYP2C19P33261 490 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms