RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 FPGSQ05932 587 aa13.36□□□□□ -0.27
H3F3B-212ENST00000592643 CALCRLQ16602 461 aa13.36□□□□□ -0.27
H3F3B-212ENST00000592643 TTC38Q5R3I4 469 aa13.36□□□□□ -0.27
H3F3B-212ENST00000592643 RASIP1Q5U651 963 aa13.36□□□□□ -0.27
H3F3B-212ENST00000592643 RDM1Q8NG50 284 aa13.36□□□□□ -0.27
H3F3B-212ENST00000592643 NAP1L4Q99733 375 aaKnown RBP13.36□□□□□ -0.27
H3F3B-212ENST00000592643 LBHD1Q9BQE6 289 aaPredicted RBP13.36□□□□□ -0.27
H3F3B-212ENST00000592643 RGL1Q9NZL6 768 aa13.36□□□□□ -0.27
H3F3B-212ENST00000592643 ZBTB39O15060 712 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 C22orf31O95567 290 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 CHRNA1P02708 482 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 SELPP16109 830 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 TRAPPC10P48553 1259 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 IGBP1P78318 339 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 PRKCEQ02156 737 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 MGAT3Q09327 533 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 TARBP2Q15633 366 aaKnown RBP13.35□□□□□ -0.27
H3F3B-212ENST00000592643 FAM160B1Q5W0V3 765 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 MTHFD1LQ6UB35 978 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 ZNF365Q70YC5 407 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 ANO5Q75V66 913 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 MIER3Q7Z3K6 550 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 RPAINQ86UA6 219 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 TDHQ8IZJ6 230 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 LINC01465Q8N7H1 131 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
H3F3B-212ENST00000592643 BANK1Q8NDB2 785 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 HSD17B14Q9BPX1 270 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 TTC12Q9H892 705 aaPredicted RBP13.35□□□□□ -0.27
H3F3B-212ENST00000592643 IL23AQ9NPF7 189 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.35□□□□□ -0.27
H3F3B-212ENST00000592643 CXXC1Q9P0U4 656 aaPredicted RBP13.35□□□□□ -0.27
H3F3B-212ENST00000592643 TUBE1Q9UJT0 475 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 TRPC6Q9Y210 931 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 MTMR6Q9Y217 621 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 NOD1Q9Y239 953 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 SAMM50Q9Y512 469 aa13.35□□□□□ -0.27
H3F3B-212ENST00000592643 TRIP12Q14669 1992 aaPredicted RBP13.34□□□□□ -0.27
H3F3B-212ENST00000592643 POTEMA6NI47 508 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 HBP1O60381 514 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 SLITRK3O94933 977 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 CXCL10P02778 98 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 OATP04181 439 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 THPOP40225 353 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 TXKP42681 527 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 RESTQ13127 1097 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
H3F3B-212ENST00000592643 MCTP1Q6DN14 999 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 FAM109BQ6ICB4 259 aaPredicted RBP13.34□□□□□ -0.27
H3F3B-212ENST00000592643 LRRC8DQ7L1W4 858 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 TRMT1LQ7Z2T5 733 aaKnown RBP13.34□□□□□ -0.27
H3F3B-212ENST00000592643 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 SLFN12Q8IYM2 578 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 TMEM199Q8N511 208 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 DNAJB3Q8WWF6 145 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
H3F3B-212ENST00000592643 SH2D3AQ9BRG2 576 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 KIF3AQ9Y496 699 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
H3F3B-212ENST00000592643 A0A1W2PPC1 479 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 RRN3P2A6NIE6 340 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 H3BQV1 296 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 CTSHP09668 335 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 SPATA31C1P0DKV0 1188 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 KLRC1P26715 233 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 FXR1P51114 621 aaKnown RBP eCLIP13.33□□□□□ -0.28
H3F3B-212ENST00000592643 PTGDRQ13258 359 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 ORC2Q13416 577 aaPredicted RBP13.33□□□□□ -0.28
H3F3B-212ENST00000592643 BFSP2Q13515 415 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 PKP1Q13835 747 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 EPHA7Q15375 998 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 FAM26DQ5JW98 314 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 NCAPH2Q6IBW4 605 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 FAM173BQ6P4H8 233 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 DEFB128Q7Z7B8 93 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 KIAA0319LQ8IZA0 1049 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 DYDC2Q96IM9 177 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 NIFKQ9BYG3 293 aaKnown RBP13.33□□□□□ -0.28
H3F3B-212ENST00000592643 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
H3F3B-212ENST00000592643 PCDHA12Q9UN75 941 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 CHD7Q9P2D1 2997 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 TET1Q8NFU7 2136 aa13.33□□□□□ -0.28
H3F3B-212ENST00000592643 SCN5AQ14524 2016 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 TANC1Q9C0D5 1861 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 A0A087WWV3 80 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 OR52Z1P0C646 297 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 GNAT1P11488 350 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 PSMC5P62195 406 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 CYP4A11Q02928 519 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 PPIGQ13427 754 aaKnown RBP eCLIP13.32□□□□□ -0.282e-17■□□□□ 8.1
H3F3B-212ENST00000592643 DRP2Q13474 957 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 CTTNQ14247 550 aaKnown RBP13.32□□□□□ -0.28
H3F3B-212ENST00000592643 ECM1Q16610 540 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 LRIT3Q3SXY7 679 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 ZNF484Q5JVG2 852 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 PLA2G4FQ68DD2 849 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 HSCBQ8IWL3 235 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 EIF2AK1Q9BQI3 630 aaKnown RBP13.32□□□□□ -0.28
H3F3B-212ENST00000592643 LXNQ9BS40 222 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms