RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MGAT3Q09327 533 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 NBR1Q14596 966 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 UBE2SQ16763 222 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 MARCH8Q5T0T0 291 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 ERICH6BQ5W0A0 696 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 APOA5Q6Q788 366 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 SYNE3Q6ZMZ3 975 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 DHX32Q7L7V1 743 aaKnown RBP11.91□□□□□ -0.5
VPS4B-207ENST00000591519 CCDC82Q8N4S0 544 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 NECAB3Q96P71 396 aaPredicted RBP11.91□□□□□ -0.5
VPS4B-207ENST00000591519 NEK1Q96PY6 1258 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 MXRA8Q9BRK3 442 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 C17orf80Q9BSJ5 609 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 IFIH1Q9BYX4 1025 aaKnown RBP11.91□□□□□ -0.5
VPS4B-207ENST00000591519 RBM28Q9NW13 759 aaKnown RBP11.91□□□□□ -0.5
VPS4B-207ENST00000591519 MTUS1Q9ULD2 1270 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 COL4A6Q14031 1691 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 RRN3P2A6NIE6 340 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 H3BNC9 293 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 FOSP01100 380 aaPredicted RBP11.9□□□□□ -0.5
VPS4B-207ENST00000591519 CTSHP09668 335 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 SP4Q02446 784 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 TSR1Q2NL82 804 aaKnown RBP11.9□□□□□ -0.5
VPS4B-207ENST00000591519 EPC2Q52LR7 807 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 RUFY4Q6ZNE9 571 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 RSPH3Q86UC2 560 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 TNPO1Q92973 898 aaKnown RBP11.9□□□□□ -0.5
VPS4B-207ENST00000591519 MRPL38Q96DV4 380 aaKnown RBP11.9□□□□□ -0.5
VPS4B-207ENST00000591519 YME1L1Q96TA2 773 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 PCYT2Q99447 389 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 RIC8AQ9NPQ8 531 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 KCNH7Q9NS40 1196 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 BRWD1Q9NSI6 2320 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 BRPF3Q9ULD4 1205 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 SQORQ9Y6N5 450 aa11.9□□□□□ -0.5
VPS4B-207ENST00000591519 COL4A4P53420 1690 aaPredicted RBP11.9□□□□□ -0.5
VPS4B-207ENST00000591519 NFASCO94856 1347 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 hCG_1984214I3L0E3 225 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 MEIS1O00470 390 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 ENPP3O14638 875 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 ATG7O95352 703 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 RCAN1P53805 252 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 PPFIA1Q13136 1202 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 LPIN1Q14693 890 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 GRIK4Q16099 956 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 WWC2Q6AWC2 1192 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 PPP1R18Q6NYC8 613 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 FAM43BQ6ZT52 329 aaPredicted RBP11.89□□□□□ -0.51
VPS4B-207ENST00000591519 PLPPR4Q7Z2D5 763 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 HEATR3Q7Z4Q2 680 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 MICU3Q86XE3 530 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 RAB11FIP4Q86YS3 637 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 TMEM192Q8IY95 271 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 ZNF713Q8N859 430 aaPredicted RBP11.89□□□□□ -0.51
VPS4B-207ENST00000591519 CYP2W1Q8TAV3 490 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 BBXQ8WY36 941 aaPredicted RBP11.89□□□□□ -0.51
VPS4B-207ENST00000591519 GLG1Q92896 1179 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 IL17RAQ96F46 866 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 C1QTNF1Q9BXJ1 281 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 GLT8D2Q9H1C3 349 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 JPH1Q9HDC5 661 aaPredicted RBP11.89□□□□□ -0.51
VPS4B-207ENST00000591519 FAM217BQ9NTX9 383 aaPredicted RBP11.89□□□□□ -0.51
VPS4B-207ENST00000591519 SLC9A2Q9UBY0 812 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 TUBE1Q9UJT0 475 aa11.89□□□□□ -0.51
VPS4B-207ENST00000591519 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
VPS4B-207ENST00000591519 CNTNAP5Q8WYK1 1306 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 IGKV6D-21A0A0A0MT36 114 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 C5orf67F2Z3F1 127 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 ZBTB43O43298 467 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 UPP2O95045 317 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 RB1P06400 928 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 HMGB1P09429 215 aaKnown RBP11.88□□□□□ -0.51
VPS4B-207ENST00000591519 LINC00271P0C7V0 271 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 INSRRP14616 1297 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 CLK2P49760 499 aaKnown RBP11.88□□□□□ -0.51
VPS4B-207ENST00000591519 KRT32Q14532 448 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 COL19A1Q14993 1142 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 PTPROQ16827 1216 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 ADCK5Q3MIX3 580 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 LEXMQ3ZCV2 418 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 CEP55Q53EZ4 464 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 FBXO47Q5MNV8 452 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 IER5Q5VY09 327 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 NIPA1Q7RTP0 329 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 CRIPAKQ8N1N5 446 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 DNAJB3Q8WWF6 145 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 KCNB2Q92953 911 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 ZNF689Q96CS4 500 aaPredicted RBP11.88□□□□□ -0.51
VPS4B-207ENST00000591519 UBE2ZQ9H832 354 aaPredicted RBP11.88□□□□□ -0.51
VPS4B-207ENST00000591519 RC3H2Q9HBD1 1191 aaKnown RBP11.88□□□□□ -0.51
VPS4B-207ENST00000591519 BARHL2Q9NY43 387 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 PCDHA2Q9Y5H9 948 aa11.88□□□□□ -0.51
VPS4B-207ENST00000591519 TTC3P53804 2025 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 SMCO2A6NFE2 343 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 STXBP3O00186 592 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 MAP3K7O43318 606 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 CDC45O75419 566 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 ARP10275 920 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 GHRP10912 638 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms