RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 MYO10Q9HD67 2058 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 ASTN1O14525 1302 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 GSG1L2A8MUP6 293 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 USP17L15C9J2P7 530 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 USP17L13C9JLJ4 530 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 USP17L11C9JVI0 530 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 USP17L18D6R9N7 530 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 USP17L22D6RA61 530 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 USP17L17D6RBQ6 530 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 USP17L19D6RCP7 530 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 USP17L20D6RJB6 530 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 SNAI1O95863 264 aaPredicted RBP9.09□□□□□ -0.95
GGA3-218ENST00000584243 HOXD8P13378 290 aaPredicted RBP9.09□□□□□ -0.95
GGA3-218ENST00000584243 PFKFB1P16118 471 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 SFPQP23246 707 aaKnown RBP eCLIP9.09□□□□□ -0.95
GGA3-218ENST00000584243 PRDX5P30044 214 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 PPARAQ07869 468 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 USP17L24Q0WX57 530 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 ORC2Q13416 577 aaPredicted RBP9.09□□□□□ -0.95
GGA3-218ENST00000584243 PICALMQ13492 652 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 NTRK3Q16288 839 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 ZNF792Q3KQV3 632 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 SBK1Q52WX2 424 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 PPP4R3BQ5MIZ7 849 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 FAM173BQ6P4H8 233 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 TMEFF1Q8IYR6 380 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 FANCBQ8NB91 859 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 C12orf42Q96LP6 360 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 CTAGE1Q96RT6 745 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 LZTS2Q9BRK4 669 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.09□□□□□ -0.95
GGA3-218ENST00000584243 MFSD1Q9H3U5 465 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 SH3GLB2Q9NR46 395 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 FAM184BQ9ULE4 1060 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 WASF3Q9UPY6 502 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 SIPA1L1O43166 1804 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 MYH15Q9Y2K3 1946 aa9.09□□□□□ -0.95
GGA3-218ENST00000584243 FBN2P35556 2912 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 B4E1Z4 1266 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 PRPF3O43395 683 aaKnown RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 LDHCP07864 332 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 PLCG2P16885 1265 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 ATF7P17544 494 aaPredicted RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 CYP7A1P22680 504 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 PTGS1P23219 599 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 SP100P23497 879 aaPredicted RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 ERCC5P28715 1186 aaPredicted RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 PPP1R2P41236 205 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 NDUFV1P49821 464 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 NDUFA8P51970 172 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 AXDND1Q5T1B0 1012 aaPredicted RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 NT5DC1Q5TFE4 455 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 CCDC186Q7Z3E2 898 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 LRRC8AQ8IWT6 810 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 ZNF654Q8IZM8 581 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 CNNM3Q8NE01 707 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 CTCFLQ8NI51 663 aaPredicted RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 WDR66Q8TBY9 1149 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 NETO1Q8TDF5 533 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 LSM14BQ9BX40 385 aaKnown RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 SRRTQ9BXP5 876 aaKnown RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 SPATC1LQ9H0A9 340 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 TTC12Q9H892 705 aaPredicted RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 SLC5A4Q9NY91 659 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 ZSWIM5Q9P217 1185 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 KCNH3Q9ULD8 1083 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 BARX2Q9UMQ3 279 aaPredicted RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 USP18Q9UMW8 372 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.08□□□□□ -0.96
GGA3-218ENST00000584243 CACNA1IQ9P0X4 2223 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 NBPF19A0A087WUL8 3843 aa9.08□□□□□ -0.96
GGA3-218ENST00000584243 NEDD4P46934 1319 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 ZNFX1Q9P2E3 1918 aaKnown RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 COL12A1Q99715 3063 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 hCG_1984214I3L0E3 225 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 LAD1O00515 517 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 GRM6O15303 877 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 ZSCAN12O43309 604 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 BAG3O95817 575 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 PLA2G2AP14555 144 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 KRT2P35908 639 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 TXLNAP40222 546 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 HTRA4P83105 476 aaPredicted RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 CEBPZQ03701 1054 aaKnown RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 CAMK1Q14012 370 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 PTPAQ15257 358 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 IFIT1BQ5T764 474 aaKnown RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 ARL6IP4Q66PJ3 421 aaKnown RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 ZC3H14Q6PJT7 736 aaKnown RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 DHX40Q8IX18 779 aaKnown RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 DIS3L2Q8IYB7 885 aaKnown RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 ZNF713Q8N859 430 aaPredicted RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 CCDC148Q8NFR7 591 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 KIF18AQ8NI77 898 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 CCDC12Q8WUD4 166 aaPredicted RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 GATA6Q92908 595 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 ZSCAN10Q96SZ4 725 aaPredicted RBP9.07□□□□□ -0.96
GGA3-218ENST00000584243 SLC26A6Q9BXS9 759 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 GOLPH3LQ9H4A5 285 aa9.07□□□□□ -0.96
GGA3-218ENST00000584243 MAGEF1Q9HAY2 307 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms