RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 GRB10Q13322 594 aa28.16■■■□□ 2.1
TSEN54-209ENST00000583454 INF2Q27J81 1249 aa28.16■■■□□ 2.1
TSEN54-209ENST00000583454 DIS3L2Q8IYB7 885 aaKnown RBP28.16■■■□□ 2.1
TSEN54-209ENST00000583454 FBXO18Q8NFZ0 1043 aa28.16■■■□□ 2.1
TSEN54-209ENST00000583454 ATP6V0A1Q93050 837 aa28.16■■■□□ 2.1
TSEN54-209ENST00000583454 SDF4Q9BRK5 362 aa28.16■■■□□ 2.1
TSEN54-209ENST00000583454 JPH1Q9HDC5 661 aaPredicted RBP28.16■■■□□ 2.1
TSEN54-209ENST00000583454 GSTTP1A0A1W2PQM5 241 aa28.15■■■□□ 2.1
TSEN54-209ENST00000583454 BTBD18B2RXH4 712 aa28.15■■■□□ 2.1
TSEN54-209ENST00000583454 IPO5O00410 1097 aaKnown RBP28.15■■■□□ 2.1
TSEN54-209ENST00000583454 THPOP40225 353 aa28.15■■■□□ 2.1
TSEN54-209ENST00000583454 ADAM17P78536 824 aa28.15■■■□□ 2.1
TSEN54-209ENST00000583454 IKBKEQ14164 716 aa28.15■■■□□ 2.1
TSEN54-209ENST00000583454 Q4G0T1 1027 aa28.15■■■□□ 2.1
TSEN54-209ENST00000583454 EARS2Q5JPH6 523 aaKnown RBP28.15■■■□□ 2.1
TSEN54-209ENST00000583454 PIK3AP1Q6ZUJ8 805 aa28.15■■■□□ 2.1
TSEN54-209ENST00000583454 ADAMTS19Q8TE59 1207 aa28.15■■■□□ 2.1
TSEN54-209ENST00000583454 SLC9A2Q9UBY0 812 aa28.15■■■□□ 2.1
TSEN54-209ENST00000583454 EMSYQ7Z589 1322 aa28.15■■■□□ 2.1
TSEN54-209ENST00000583454 RSPH10B2B2RC85 870 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 TNFRSF10AO00220 468 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 EFCAB14O75071 495 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 RSPH10BP0C881 870 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 GUCY1B3Q02153 619 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 SP4Q02446 784 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 TFF2Q03403 129 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 CUL4AQ13619 759 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.14■■■□□ 2.1
TSEN54-209ENST00000583454 DBF4BQ8NFT6 615 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 SEPT1Q8WYJ6 367 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 RAD9AQ99638 391 aa28.14■■■□□ 2.1
TSEN54-209ENST00000583454 GTPBP6O43824 516 aaPredicted RBP28.13■■■□□ 2.09
TSEN54-209ENST00000583454 PLEKHG4Q58EX7 1191 aa28.13■■■□□ 2.09
TSEN54-209ENST00000583454 NEK8Q86SG6 692 aa28.13■■■□□ 2.09
TSEN54-209ENST00000583454 ZNF577Q9BSK1 485 aa28.13■■■□□ 2.09
TSEN54-209ENST00000583454 TBC1D22BQ9NU19 505 aa28.13■■■□□ 2.09
TSEN54-209ENST00000583454 LINC01553A4QN01 128 aa28.12■■■□□ 2.09
TSEN54-209ENST00000583454 MSH4O15457 936 aa28.12■■■□□ 2.09
TSEN54-209ENST00000583454 TDP2O95551 362 aa28.12■■■□□ 2.09
TSEN54-209ENST00000583454 BMP1P13497 986 aa28.12■■■□□ 2.09
TSEN54-209ENST00000583454 TCF7P36402 384 aaPredicted RBP28.12■■■□□ 2.09
TSEN54-209ENST00000583454 SAFBQ15424 915 aaKnown RBP eCLIP28.12■■■□□ 2.09
TSEN54-209ENST00000583454 ZBED2Q9BTP6 218 aa28.12■■■□□ 2.09
TSEN54-209ENST00000583454 SETD4Q9NVD3 440 aa28.12■■■□□ 2.09
TSEN54-209ENST00000583454 KIF3AQ9Y496 699 aa28.12■■■□□ 2.09
TSEN54-209ENST00000583454 FAM205CA6NFA0 338 aa28.11■■■□□ 2.09
TSEN54-209ENST00000583454 ATG7O95352 703 aa28.11■■■□□ 2.09
TSEN54-209ENST00000583454 PPP4R3AQ6IN85 833 aa28.11■■■□□ 2.09
TSEN54-209ENST00000583454 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.11■■■□□ 2.09
TSEN54-209ENST00000583454 NLRC5Q86WI3 1866 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 CAND2O75155 1236 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 CCNE2O96020 404 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 GCFC2P16383 781 aaKnown RBP28.1■■■□□ 2.09
TSEN54-209ENST00000583454 ACTR2P61160 394 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 ERVK-21P61565 698 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 LETM2Q2VYF4 491 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 UTP14CQ5TAP6 766 aaKnown RBP28.1■■■□□ 2.09
TSEN54-209ENST00000583454 GDPD5Q8WTR4 605 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 LMBR1Q8WVP7 490 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 SLC5A5Q92911 643 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 SNX21Q969T3 373 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 UIMC1Q96RL1 719 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 TSPYL2Q9H2G4 693 aaPredicted RBP28.1■■■□□ 2.09
TSEN54-209ENST00000583454 COL4A6Q14031 1691 aa28.1■■■□□ 2.09
TSEN54-209ENST00000583454 GJB2P29033 226 aa28.09■■■□□ 2.09
TSEN54-209ENST00000583454 FAM117BQ6P1L5 589 aa28.09■■■□□ 2.09
TSEN54-209ENST00000583454 UHRF1Q96T88 793 aaPredicted RBP28.09■■■□□ 2.09
TSEN54-209ENST00000583454 RIT2Q99578 217 aa28.09■■■□□ 2.09
TSEN54-209ENST00000583454 NAP1L4Q99733 375 aaKnown RBP28.09■■■□□ 2.09
TSEN54-209ENST00000583454 FOXP1Q9H334 677 aaPredicted RBP28.09■■■□□ 2.09
TSEN54-209ENST00000583454 SUGCTQ9HAC7 445 aa28.09■■■□□ 2.09
TSEN54-209ENST00000583454 DDX25Q9UHL0 483 aaKnown RBP28.09■■■□□ 2.09
TSEN54-209ENST00000583454 SMC3Q9UQE7 1217 aa28.09■■■□□ 2.09
TSEN54-209ENST00000583454 CTSHP09668 335 aa28.08■■■□□ 2.09
TSEN54-209ENST00000583454 KCNQ1P51787 676 aa28.08■■■□□ 2.09
TSEN54-209ENST00000583454 HTRA4P83105 476 aaPredicted RBP28.08■■■□□ 2.09
TSEN54-209ENST00000583454 ABHD15Q6UXT9 468 aa28.08■■■□□ 2.09
TSEN54-209ENST00000583454 PCYT2Q99447 389 aa28.08■■■□□ 2.09
TSEN54-209ENST00000583454 ZNF215Q9UL58 517 aaPredicted RBP28.08■■■□□ 2.09
TSEN54-209ENST00000583454 DDX39AO00148 427 aaKnown RBP28.07■■■□□ 2.08
TSEN54-209ENST00000583454 SKIV2LQ15477 1246 aaKnown RBP28.07■■■□□ 2.08
TSEN54-209ENST00000583454 FAM26DQ5JW98 314 aa28.07■■■□□ 2.08
TSEN54-209ENST00000583454 ZNF746Q6NUN9 644 aaPredicted RBP28.07■■■□□ 2.08
TSEN54-209ENST00000583454 ETNPPLQ8TBG4 499 aa28.07■■■□□ 2.08
TSEN54-209ENST00000583454 SP7Q8TDD2 431 aaPredicted RBP28.07■■■□□ 2.08
TSEN54-209ENST00000583454 NECAB3Q96P71 396 aaPredicted RBP28.07■■■□□ 2.08
TSEN54-209ENST00000583454 TGS1Q96RS0 853 aaKnown RBP28.07■■■□□ 2.08
TSEN54-209ENST00000583454 SMARCAD1Q9H4L7 1026 aa28.07■■■□□ 2.08
TSEN54-209ENST00000583454 MTUS1Q9ULD2 1270 aa28.07■■■□□ 2.08
TSEN54-209ENST00000583454 IGKV6D-21A0A0A0MT36 114 aa28.06■■■□□ 2.08
TSEN54-209ENST00000583454 SLC37A4O43826 429 aa28.06■■■□□ 2.08
TSEN54-209ENST00000583454 GNAT1P11488 350 aa28.06■■■□□ 2.08
TSEN54-209ENST00000583454 KRT76Q01546 638 aa28.06■■■□□ 2.08
TSEN54-209ENST00000583454 KCNMB3Q9NPA1 279 aa28.06■■■□□ 2.08
TSEN54-209ENST00000583454 LMCD1Q9NZU5 365 aa28.06■■■□□ 2.08
TSEN54-209ENST00000583454 RALGAPA2Q2PPJ7 1873 aa28.06■■■□□ 2.08
TSEN54-209ENST00000583454 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.05■■■□□ 2.08
TSEN54-209ENST00000583454 K7ELQ4 463 aaPredicted RBP28.05■■■□□ 2.08
TSEN54-209ENST00000583454 CCNT1O60563 726 aaKnown RBP28.05■■■□□ 2.08
TSEN54-209ENST00000583454 PSMD10O75832 226 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms