RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ELOA2Q8IYF1 753 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 DIS3LQ8TF46 1054 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PAWRQ96IZ0 340 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 LXNQ9BS40 222 aa18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 AP5M1Q9H0R1 490 aa18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CUEDC2Q9H467 287 aa18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 BLOC1S4Q9NUP1 217 aa18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 WRAP73Q9P2S5 460 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 MAFBQ9Y5Q3 323 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP3-228ENST00000583363 A0A087WWV3 80 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 A6NJR5 290 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 SOX1O00570 391 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 DKC1O60832 514 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 KINO60870 393 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 STBD1O95210 358 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 XRCC6P12956 609 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 HOXD8P13378 290 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CAPN2P17655 700 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 STAT5BP51692 787 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 GJA9P57773 515 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PSMC6P62333 389 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 NKX3-2P78367 333 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 UGCGQ16739 394 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PDXDC2PQ6P474 469 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 POTEGQ6S5H5 508 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 TLK2Q86UE8 772 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CNNM3Q8NE01 707 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 AFAP1L1Q8TED9 768 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 RAD54LQ92698 747 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 ATP6V0A1Q93050 837 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 LENG1Q96BZ8 264 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 NACC1Q96RE7 527 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 ZNF302Q9NR11 478 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 STK17AQ9UEE5 414 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 DNM3Q9UQ16 869 aa18.28■□□□□ 0.52
CDK5RAP3-228ENST00000583363 COL6A3P12111 3177 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 A0A1W2PPC1 479 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 E9PMD0 336 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 BACH1O14867 736 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 ZNF862O60290 1169 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 MMP3P08254 477 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 RARBP10826 455 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 ATP4AP20648 1035 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 UTP14CQ5TAP6 766 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 FAM160B1Q5W0V3 765 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 KANK3Q6NY19 840 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 PLPPR4Q7Z2D5 763 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 SH3RF1Q7Z6J0 888 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 CEP57L1Q8IYX8 460 aa18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 UPF3AQ9H1J1 476 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 HMX1Q9NP08 348 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 DDX20Q9UHI6 824 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP3-228ENST00000583363 ZBTB39O15060 712 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 CTAGE5O15320 804 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 EYA4O95677 639 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 MDM2Q00987 491 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 DGKDQ16760 1214 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 PAGE5Q96GU1 130 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 LRCH3Q96II8 777 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 CLSTN2Q9H4D0 955 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 SMARCAD1Q9H4L7 1026 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 AZI2Q9H6S1 392 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 MAGEF1Q9HAY2 307 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 KBTBD4Q9NVX7 518 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 TMEM63CQ9P1W3 806 aa18.26■□□□□ 0.51
CDK5RAP3-228ENST00000583363 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 LGALS2P05162 132 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 PLA2G4BP0C869 781 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 CPT1AP50416 773 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 IRX5P78411 483 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 MCM6Q14566 821 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 CAVIN1Q6NZI2 390 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 SV2BQ7L1I2 683 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 NECAB2Q7Z6G3 386 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 SYT2Q8N9I0 419 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 PIGOQ8TEQ8 1089 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 LARP4BQ92615 738 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 GLG1Q92896 1179 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 MTRQ99707 1265 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 C16orf70Q9BSU1 422 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 ANKEF1Q9NU02 776 aa18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 DBR1Q9UK59 544 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP3-228ENST00000583363 EMSYQ7Z589 1322 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 MSCO60682 206 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 YWHABP31946 246 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 MNX1P50219 401 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 SLC26A2P50443 739 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 SLC12A3P55017 1021 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 CAMK4Q16566 473 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 FSCN1Q16658 493 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 BRDTQ58F21 947 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 XKR3Q5GH77 459 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 CCDC183Q5T5S1 534 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 LHX8Q68G74 356 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 OTUD6AQ7L8S5 288 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 KLHDC9Q8NEP7 349 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 NUP62CLQ9H1M0 184 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 SPC25Q9HBM1 224 aa18.24■□□□□ 0.51
CDK5RAP3-228ENST00000583363 NRBP2Q9NSY0 501 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms