RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 TOMM22Q9NS69 142 aa7.54□□□□□ -1.2
TVP23B-209ENST00000581733 AATFQ9NY61 560 aaKnown RBP eCLIP7.54□□□□□ -1.2
TVP23B-209ENST00000581733 LMCD1Q9NZU5 365 aa7.54□□□□□ -1.2
TVP23B-209ENST00000581733 U3KQE9 123 aa7.54□□□□□ -1.2
TVP23B-209ENST00000581733 ROBO3Q96MS0 1386 aa7.54□□□□□ -1.2
TVP23B-209ENST00000581733 NEDD4P46934 1319 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 GREB1LQ9C091 1923 aaPredicted RBP7.53□□□□□ -1.2
TVP23B-209ENST00000581733 KLF18A0A0U1RQI7 1052 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 CCDC69A6NI79 296 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 GOLGA8BA8MQT2 603 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 MINDY4BA8MYZ0 360 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 B4E1Z4 1266 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 SH2B2O14492 632 aaPredicted RBP7.53□□□□□ -1.2
TVP23B-209ENST00000581733 CPLX1O14810 134 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 PRKAB2O43741 272 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 EIF4EBP3O60516 100 aaPredicted RBP7.53□□□□□ -1.2
TVP23B-209ENST00000581733 BAG4O95429 457 aaKnown RBP7.53□□□□□ -1.2
TVP23B-209ENST00000581733 ECEL1O95672 775 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 LIFRP42702 1097 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 GRIA4P48058 902 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 RCAN1P53805 252 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 FANCCQ00597 558 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 PDE4BQ07343 736 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 TAF1CQ15572 869 aaPredicted RBP7.53□□□□□ -1.2
TVP23B-209ENST00000581733 KCNMB1Q16558 191 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 AOC3Q16853 763 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 CCDC93Q567U6 631 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 CCDC178Q5BJE1 867 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 TMEM67Q5HYA8 995 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 RPS26P11Q5JNZ5 115 aaPredicted RBP7.53□□□□□ -1.2
TVP23B-209ENST00000581733 HP1BP3Q5SSJ5 553 aaPredicted RBP7.53□□□□□ -1.2
TVP23B-209ENST00000581733 LARP1BQ659C4 914 aaKnown RBP7.53□□□□□ -1.2
TVP23B-209ENST00000581733 RTKN2Q8IZC4 609 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 TTLL6Q8N841 843 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 SDR42E1Q8WUS8 393 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 UBAC1Q9BSL1 405 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 KRTAP9-3Q9BYQ3 159 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 LRRC2Q9BYS8 371 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 MTFR1LQ9H019 292 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 ZNF287Q9HBT7 754 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 DCP1AQ9NPI6 582 aaPredicted RBP7.53□□□□□ -1.2
TVP23B-209ENST00000581733 NID2Q14112 1375 aa7.53□□□□□ -1.2
TVP23B-209ENST00000581733 GAKO14976 1311 aa7.52□□□□□ -1.2
TVP23B-209ENST00000581733 SIPA1L1O43166 1804 aa7.52□□□□□ -1.2
TVP23B-209ENST00000581733 ATAD5Q96QE3 1844 aa7.52□□□□□ -1.2
TVP23B-209ENST00000581733 GPR75-ASB3A0A0A6YYF3 556 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 A0A0G2JLW4 131 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 VPS37CA5D8V6 355 aaPredicted RBP7.52□□□□□ -1.21
TVP23B-209ENST00000581733 ZNF503-AS2A6NEH8 195 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 H3BQV1 296 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 IFIT3O14879 490 aaKnown RBP7.52□□□□□ -1.21
TVP23B-209ENST00000581733 ORC4O43929 436 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 ECE2O60344 883 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 F13A1P00488 732 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 SYT1P21579 422 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 PDIA3P30101 505 aaKnown RBP7.52□□□□□ -1.21
TVP23B-209ENST00000581733 CHRNA5P30532 468 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 ZNF76P36508 570 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 BTDP43251 543 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 FCGRTP55899 365 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 ANTXR2P58335 489 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 TGFB2P61812 414 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 PCDH1Q08174 1060 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 WTAPQ15007 396 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 PPP2R5BQ15173 497 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 RRP12Q5JTH9 1297 aaKnown RBP7.52□□□□□ -1.21
TVP23B-209ENST00000581733 SGMS1Q86VZ5 419 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 METTL16Q86W50 562 aaKnown RBP7.52□□□□□ -1.21
TVP23B-209ENST00000581733 IQCA1Q86XH1 822 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 TEX11Q8IYF3 940 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 SMARCC2Q8TAQ2 1214 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 ZNF384Q8TF68 577 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 VPS33BQ9H267 617 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 PRDM7Q9NQW5 492 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 FAM53CQ9NYF3 392 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 CRIM1Q9NZV1 1036 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 JAG2Q9Y219 1238 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 SNED1Q8TER0 1413 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 MYO3BQ8WXR4 1341 aa7.52□□□□□ -1.21
TVP23B-209ENST00000581733 A0A096LPE4 126 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 CCDC196A0A1B0GTZ2 297 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 A0A1W2PPZ6 126 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 PTPDC1A2A3K4 754 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 GOLGA8AA7E2F4 631 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 ZBTB43O43298 467 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 TSPAN15O95858 294 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 CALM1P0DP23 149 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 CALM2P0DP24 149 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 CALM3P0DP25 149 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 NCLP19338 710 aaKnown RBP7.51□□□□□ -1.21
TVP23B-209ENST00000581733 METAP2P50579 478 aaKnown RBP eCLIP7.51□□□□□ -1.21
TVP23B-209ENST00000581733 HDLBPQ00341 1268 aaKnown RBP7.51□□□□□ -1.21
TVP23B-209ENST00000581733 KIAA2012Q0VF49 1180 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 ST3GAL1Q11201 340 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 SCRN1Q12765 414 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 ZNF423Q2M1K9 1284 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 SPRED3Q2MJR0 410 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 MEI1Q5TIA1 1274 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 STRIP1Q5VSL9 837 aa7.51□□□□□ -1.21
TVP23B-209ENST00000581733 CTR9Q6PD62 1173 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms