RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 CEP55Q53EZ4 464 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 ZNF618Q5T7W0 954 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 PSRC1Q6PGN9 363 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-211ENST00000581536 TRAF7Q6Q0C0 670 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 ZNF713Q8N859 430 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-211ENST00000581536 NLRP7Q8WX94 980 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 CRYGNQ8WXF5 182 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 SEPT1Q8WYJ6 367 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 ATP6V0A1Q93050 837 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 ZBTB10Q96DT7 871 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 PCYT2Q99447 389 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 CDX2Q99626 313 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-211ENST00000581536 RNF26Q9BY78 433 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-211ENST00000581536 PBX4Q9BYU1 374 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
TOP3A-211ENST00000581536 AGO4Q9HCK5 861 aaKnown RBP11.07□□□□□ -0.64
TOP3A-211ENST00000581536 C6orf50Q9HD87 102 aa11.07□□□□□ -0.64
TOP3A-211ENST00000581536 UNC80Q8N2C7 3258 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 C17orf102A2RUQ5 167 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 ZBBXA8MT70 800 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 MAFGO15525 162 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 AK2P54819 239 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 ADAM17P78536 824 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 MBTPS1Q14703 1052 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 GRIN2CQ14957 1233 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 ZNF697Q5TEC3 545 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 TMCO2Q7Z6W1 182 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-211ENST00000581536 NECAB1Q8N987 351 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 GIMAP8Q8ND71 665 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-211ENST00000581536 CDHR1Q96JP9 859 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 EHMT1Q9H9B1 1298 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 GJB4Q9NTQ9 266 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 YBX2Q9Y2T7 364 aaKnown RBP11.06□□□□□ -0.64
TOP3A-211ENST00000581536 SLC4A7Q9Y6M7 1214 aa11.06□□□□□ -0.64
TOP3A-211ENST00000581536 SIP14410 1827 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 IGLV3-22A0A075B6J6 115 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 ESYT2A0FGR8 921 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 DDX39AO00148 427 aaKnown RBP11.05□□□□□ -0.64
TOP3A-211ENST00000581536 DHX15O43143 795 aaKnown RBP11.05□□□□□ -0.64
TOP3A-211ENST00000581536 LARGE1O95461 756 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 CTDNEP1O95476 244 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 CCNE2O96020 404 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 CYP3A4P08684 503 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 SELPP16109 830 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 HOXC8P31273 242 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 THPOP40225 353 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 NLRP5P59047 1200 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 AP3B2Q13367 1082 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 LRRC8DQ7L1W4 858 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 SERINC5Q86VE9 423 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 PLA2G4DQ86XP0 818 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 CAGE1Q8TC20 777 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 AFAP1L1Q8TED9 768 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 MYLIPQ8WY64 445 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 GJA10Q969M2 543 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 TIFAQ96CG3 184 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 GLT8D2Q9H1C3 349 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 NKX2-4Q9H2Z4 354 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 ZNF576Q9H609 170 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 SLC9A2Q9UBY0 812 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 KCNJ14Q9UNX9 436 aa11.05□□□□□ -0.64
TOP3A-211ENST00000581536 MICAL3Q7RTP6 2002 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 TRANK1O15050 2925 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 CPLX1O14810 134 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 PFKFB2O60825 505 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 ATG7O95352 703 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 GNA11P29992 359 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 RFC2P35250 354 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 ANAPC15P60006 121 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 ACTR2P61160 394 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 NPY5RQ15761 445 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 ME3Q16798 604 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 MARCH8Q5T0T0 291 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 RUFY4Q6ZNE9 571 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 REXO1Q8N1G1 1221 aaKnown RBP11.04□□□□□ -0.64
TOP3A-211ENST00000581536 CCDC155Q8N6L0 562 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 LMBR1Q8WVP7 490 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 GLG1Q92896 1179 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 TMUB1Q9BVT8 246 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 PRR14Q9BWN1 585 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-211ENST00000581536 JPH1Q9HDC5 661 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-211ENST00000581536 STXBP5LQ9Y2K9 1186 aa11.04□□□□□ -0.64
TOP3A-211ENST00000581536 RSPH10B2B2RC85 870 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 M0R2N6 131 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 LGR5O75473 907 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 DEXIO95424 95 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 CXCL10P02778 98 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 CTSHP09668 335 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 RSPH10BP0C881 870 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 ATP4AP20648 1035 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 NEK4P51957 841 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 IGBP1P78318 339 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 RBL2Q08999 1139 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 PRR16Q569H4 304 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 ABHD15Q6UXT9 468 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.03□□□□□ -0.64
TOP3A-211ENST00000581536 TRIM22Q8IYM9 498 aa11.03□□□□□ -0.64
TOP3A-211ENST00000581536 CCDC12Q8WUD4 166 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-211ENST00000581536 TRAPPC12Q8WVT3 735 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms