RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 LINC00301Q8NCQ3 95 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 KCNG4Q8TDN1 519 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 SCLYQ96I15 445 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 FTOQ9C0B1 505 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC84-209ENST00000580556 SCAND2PQ9GZW5 306 aaPredicted RBP13.67□□□□□ -0.22
CCDC84-209ENST00000580556 HIPK3Q9H422 1215 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 JPH1Q9HDC5 661 aaPredicted RBP13.67□□□□□ -0.22
CCDC84-209ENST00000580556 VAV3Q9UKW4 847 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 CLIC4Q9Y696 253 aa13.67□□□□□ -0.22
CCDC84-209ENST00000580556 GRIN2DO15399 1336 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 ZBBXA8MT70 800 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 PPP6R2O75170 966 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 HOXD8P13378 290 aaPredicted RBP13.66□□□□□ -0.22
CCDC84-209ENST00000580556 FXR2P51116 673 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCDC84-209ENST00000580556 CLEC17AQ6ZS10 378 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 TLK2Q86UE8 772 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 DHX37Q8IY37 1157 aaKnown RBP13.66□□□□□ -0.22
CCDC84-209ENST00000580556 SMAP1Q8IYB5 467 aaPredicted RBP13.66□□□□□ -0.22
CCDC84-209ENST00000580556 RDM1Q8NG50 284 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 PPTC7Q8NI37 304 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 TNPO1Q92973 898 aaKnown RBP13.66□□□□□ -0.22
CCDC84-209ENST00000580556 TEKT3Q9BXF9 490 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 TRPV6Q9H1D0 765 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 MTIF3Q9H2K0 278 aaKnown RBP13.66□□□□□ -0.22
CCDC84-209ENST00000580556 CD320Q9NPF0 282 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 SLC9A2Q9UBY0 812 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 TCEAL9Q9UHQ7 104 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 PCDHA12Q9UN75 941 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 PCDHA11Q9Y5I1 949 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 SLC4A7Q9Y6M7 1214 aa13.66□□□□□ -0.22
CCDC84-209ENST00000580556 A6NJR5 290 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 SPTLC2O15270 562 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 MARCH6O60337 910 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 CA3P07451 260 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 SFNP31947 248 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 JAK3P52333 1124 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 SPIRE1Q08AE8 756 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 PDIA5Q14554 519 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 STK38Q15208 465 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 TMEM266Q2M3C6 531 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 FOXD4L6Q3SYB3 417 aaPredicted RBP13.65□□□□□ -0.22
CCDC84-209ENST00000580556 TMEM63BQ5T3F8 832 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 FOXD4L3Q6VB84 417 aaPredicted RBP13.65□□□□□ -0.22
CCDC84-209ENST00000580556 DTHD1Q6ZMT9 781 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 CYFIP1Q7L576 1253 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 IGSF22Q8N9C0 903 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 SLC43A3Q8NBI5 491 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 NOC4LQ9BVI4 516 aaKnown RBP13.65□□□□□ -0.22
CCDC84-209ENST00000580556 RAB34Q9BZG1 259 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 TTC12Q9H892 705 aaPredicted RBP13.65□□□□□ -0.22
CCDC84-209ENST00000580556 MLXIPQ9HAP2 919 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 SPC25Q9HBM1 224 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 PKD2L1Q9P0L9 805 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 RCOR1Q9UKL0 485 aa13.65□□□□□ -0.22
CCDC84-209ENST00000580556 SRPRBQ9Y5M8 271 aaKnown RBP13.65□□□□□ -0.22
CCDC84-209ENST00000580556 WDR64B1ANS9 1081 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 B4GALT4O60513 344 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 GPR37L1O60883 481 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 CCNE2O96020 404 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 TXKP42681 527 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 CPT1AP50416 773 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 PSMC6P62333 389 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 CEBPZQ03701 1054 aaKnown RBP13.64□□□□□ -0.23
CCDC84-209ENST00000580556 ITGA7Q13683 1181 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 BRDTQ58F21 947 aaPredicted RBP13.64□□□□□ -0.23
CCDC84-209ENST00000580556 SPRED2Q7Z698 418 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 OR6J1Q8NGC5 347 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 LEO1Q8WVC0 666 aaPredicted RBP13.64□□□□□ -0.23
CCDC84-209ENST00000580556 AK8Q96MA6 479 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 SPATA33Q96N06 139 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 AP5M1Q9H0R1 490 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 UNC45AQ9H3U1 944 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 TFIP11Q9UBB9 837 aaKnown RBP13.64□□□□□ -0.23
CCDC84-209ENST00000580556 FBXO2Q9UK22 296 aaPredicted RBP13.64□□□□□ -0.23
CCDC84-209ENST00000580556 STK24Q9Y6E0 443 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 MUC6Q6W4X9 2439 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 SCN5AQ14524 2016 aa13.64□□□□□ -0.23
CCDC84-209ENST00000580556 TRANK1O15050 2925 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 NOP56O00567 594 aaKnown RBP13.63□□□□□ -0.23
CCDC84-209ENST00000580556 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 ATG7O95352 703 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 ATP2A2P16615 1042 aaKnown RBP13.63□□□□□ -0.23
CCDC84-209ENST00000580556 NCLP19338 710 aaKnown RBP13.63□□□□□ -0.23
CCDC84-209ENST00000580556 POU3F3P20264 500 aaPredicted RBP13.63□□□□□ -0.23
CCDC84-209ENST00000580556 LONP1P36776 959 aaKnown RBP13.63□□□□□ -0.23
CCDC84-209ENST00000580556 ACTR2P61160 394 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 IL17AQ16552 155 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 FSCN1Q16658 493 aaKnown RBP13.63□□□□□ -0.23
CCDC84-209ENST00000580556 HSDL1Q3SXM5 330 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 KRI1Q8N9T8 703 aaKnown RBP13.63□□□□□ -0.23
CCDC84-209ENST00000580556 COPS5Q92905 334 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 GJA10Q969M2 543 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 SPATA32Q96LK8 384 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 GPR20Q99678 358 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 BCAS3Q9H6U6 928 aa13.63□□□□□ -0.23
CCDC84-209ENST00000580556 IGKV6D-21A0A0A0MT36 114 aa13.62□□□□□ -0.23
CCDC84-209ENST00000580556 RBAK-RBAKDNI3L0D1 243 aa13.62□□□□□ -0.23
CCDC84-209ENST00000580556 DYNC1LI2O43237 492 aaPredicted RBP13.62□□□□□ -0.23
CCDC84-209ENST00000580556 SLC26A4O43511 780 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms