RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MARCH8Q5T0T0 291 aa22.22■■□□□ 1.15
LIMD2-209ENST00000580222 BLOC1S2Q6QNY1 142 aa22.22■■□□□ 1.15
LIMD2-209ENST00000580222 IRF2BPLQ9H1B7 796 aa22.22■■□□□ 1.15
LIMD2-209ENST00000580222 S1PR5Q9H228 398 aa22.22■■□□□ 1.15
LIMD2-209ENST00000580222 MAP3K20Q9NYL2 800 aaKnown RBP22.22■■□□□ 1.15
LIMD2-209ENST00000580222 CDH22Q9UJ99 828 aa22.22■■□□□ 1.15
LIMD2-209ENST00000580222 CDY2AQ9Y6F7 541 aa22.22■■□□□ 1.15
LIMD2-209ENST00000580222 NRCAMQ92823 1304 aa22.22■■□□□ 1.15
LIMD2-209ENST00000580222 GVINP1Q7Z2Y8 2422 aa22.21■■□□□ 1.15
LIMD2-209ENST00000580222 IFIT3O14879 490 aaKnown RBP22.21■■□□□ 1.15
LIMD2-209ENST00000580222 SP100P23497 879 aaPredicted RBP22.21■■□□□ 1.15
LIMD2-209ENST00000580222 ANTXR2P58335 489 aa22.21■■□□□ 1.15
LIMD2-209ENST00000580222 TMEM105Q8N8V8 129 aa22.21■■□□□ 1.15
LIMD2-209ENST00000580222 APOL5Q9BWW9 433 aa22.21■■□□□ 1.15
LIMD2-209ENST00000580222 TTC3P53804 2025 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 KLRF2D3W0D1 207 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 GCOM1H8Y6P7 765 aaPredicted RBP22.2■■□□□ 1.14
LIMD2-209ENST00000580222 ZBTB5O15062 677 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 POLR2MP0CAP2 368 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 ARP10275 920 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 NBL1P41271 181 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 ERVFC1P60507 584 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 COL9A3Q14050 684 aaPredicted RBP22.2■■□□□ 1.14
LIMD2-209ENST00000580222 NEDD9Q14511 834 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 TSHZ1Q6ZSZ6 1077 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 SMOC2Q9H3U7 446 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 HCSTQ9UBK5 93 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 FAM186AA6NE01 2351 aa22.2■■□□□ 1.14
LIMD2-209ENST00000580222 CPA1P15085 419 aa22.19■■□□□ 1.14
LIMD2-209ENST00000580222 RBM25P49756 843 aaKnown RBP22.19■■□□□ 1.14
LIMD2-209ENST00000580222 TAF2Q6P1X5 1199 aa22.19■■□□□ 1.14
LIMD2-209ENST00000580222 DHX32Q7L7V1 743 aaKnown RBP22.19■■□□□ 1.14
LIMD2-209ENST00000580222 NPAS4Q8IUM7 802 aa22.19■■□□□ 1.14
LIMD2-209ENST00000580222 MICAL1Q8TDZ2 1067 aa22.19■■□□□ 1.14
LIMD2-209ENST00000580222 TMEM87BQ96K49 555 aa22.19■■□□□ 1.14
LIMD2-209ENST00000580222 TM6SF1Q9BZW5 370 aa22.19■■□□□ 1.14
LIMD2-209ENST00000580222 MAD2L2Q9UI95 211 aa22.19■■□□□ 1.14
LIMD2-209ENST00000580222 ZNF215Q9UL58 517 aaPredicted RBP22.19■■□□□ 1.14
LIMD2-209ENST00000580222 MBLAC1A4D2B0 266 aaPredicted RBP22.18■■□□□ 1.14
LIMD2-209ENST00000580222 RPS6KB1P23443 525 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 KCNC3Q14003 757 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 WTAPQ15007 396 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 DUSP6Q16828 381 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 IFIT1BQ5T764 474 aaKnown RBP22.18■■□□□ 1.14
LIMD2-209ENST00000580222 SYCE2Q6PIF2 218 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 FRMD5Q7Z6J6 570 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 HOMER1Q86YM7 354 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 TCEANC2Q96MN5 208 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 TBC1D32Q96NH3 1257 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 PIGSQ96S52 555 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 MTA3Q9BTC8 594 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 LRRC2Q9BYS8 371 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 CYP46A1Q9Y6A2 500 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 DMXL1Q9Y485 3027 aa22.18■■□□□ 1.14
LIMD2-209ENST00000580222 FRMPD4Q14CM0 1322 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 MARK3P27448 753 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 FGD1P98174 961 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 PPFIA1Q13136 1202 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 GRIK4Q16099 956 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 RUFY3Q7L099 469 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 SAMD3Q8N6K7 520 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 KREMEN2Q8NCW0 462 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 TMX1Q9H3N1 280 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 ZSWIM6Q9HCJ5 1215 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 ZNF292O60281 2723 aa22.17■■□□□ 1.14
LIMD2-209ENST00000580222 PALM3A6NDB9 673 aaPredicted RBP22.16■■□□□ 1.14
LIMD2-209ENST00000580222 SH2B2O14492 632 aaPredicted RBP22.16■■□□□ 1.14
LIMD2-209ENST00000580222 FIBPO43427 364 aa22.16■■□□□ 1.14
LIMD2-209ENST00000580222 BRD1O95696 1058 aa22.16■■□□□ 1.14
LIMD2-209ENST00000580222 NUBP1P53384 320 aa22.16■■□□□ 1.14
LIMD2-209ENST00000580222 MRPS6P82932 125 aaKnown RBP22.16■■□□□ 1.14
LIMD2-209ENST00000580222 SEC23AQ15436 765 aa22.16■■□□□ 1.14
LIMD2-209ENST00000580222 GNPTABQ3T906 1256 aa22.16■■□□□ 1.14
LIMD2-209ENST00000580222 ERMP1Q7Z2K6 904 aa22.16■■□□□ 1.14
LIMD2-209ENST00000580222 TUBE1Q9UJT0 475 aa22.16■■□□□ 1.14
LIMD2-209ENST00000580222 PADI3Q9ULW8 664 aa22.16■■□□□ 1.14
LIMD2-209ENST00000580222 GSTTP1A0A1W2PQM5 241 aa22.15■■□□□ 1.14
LIMD2-209ENST00000580222 ATP9AO75110 1047 aa22.15■■□□□ 1.14
LIMD2-209ENST00000580222 IBSPP21815 317 aaPredicted RBP22.15■■□□□ 1.14
LIMD2-209ENST00000580222 TCF7P36402 384 aaPredicted RBP22.15■■□□□ 1.14
LIMD2-209ENST00000580222 ID4P47928 161 aa22.15■■□□□ 1.14
LIMD2-209ENST00000580222 EXOSC10Q01780 885 aaKnown RBP22.15■■□□□ 1.14
LIMD2-209ENST00000580222 TMEM62Q0P6H9 643 aa22.15■■□□□ 1.14
LIMD2-209ENST00000580222 APOBRQ0VD83 1088 aa22.15■■□□□ 1.14
LIMD2-209ENST00000580222 ANKRD54Q6NXT1 300 aa22.15■■□□□ 1.14
LIMD2-209ENST00000580222 ZBTB33Q86T24 672 aa22.15■■□□□ 1.14
LIMD2-209ENST00000580222 RSPH3Q86UC2 560 aa22.15■■□□□ 1.14
LIMD2-209ENST00000580222 FAM49AQ9H0Q0 323 aaPredicted RBP22.15■■□□□ 1.14
LIMD2-209ENST00000580222 DNAH14Q0VDD8 3507 aa22.15■■□□□ 1.14
LIMD2-209ENST00000580222 FSCN2O14926 492 aa22.14■■□□□ 1.13
LIMD2-209ENST00000580222 CYTH3O43739 400 aa22.14■■□□□ 1.13
LIMD2-209ENST00000580222 SCG2P13521 617 aa22.14■■□□□ 1.13
LIMD2-209ENST00000580222 TECP42680 631 aa22.14■■□□□ 1.13
LIMD2-209ENST00000580222 IGBP1P78318 339 aa22.14■■□□□ 1.13
LIMD2-209ENST00000580222 TMEM184AQ6ZMB5 413 aa22.14■■□□□ 1.13
LIMD2-209ENST00000580222 NFXL1Q6ZNB6 911 aa22.14■■□□□ 1.13
LIMD2-209ENST00000580222 IGDCC4Q8TDY8 1250 aa22.14■■□□□ 1.13
LIMD2-209ENST00000580222 LY9Q9HBG7 655 aa22.14■■□□□ 1.13
LIMD2-209ENST00000580222 KIAA1671Q9BY89 1806 aa22.14■■□□□ 1.13
LIMD2-209ENST00000580222 CCDC69A6NI79 296 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms