RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 RRN3P2A6NIE6 340 aa25.51■■□□□ 1.67
NDEL1-207ENST00000580012 ZBTB42B2RXF5 422 aa25.51■■□□□ 1.67
NDEL1-207ENST00000580012 EVI5O60447 810 aa25.51■■□□□ 1.67
NDEL1-207ENST00000580012 DKC1O60832 514 aaKnown RBP eCLIP25.51■■□□□ 1.67
NDEL1-207ENST00000580012 ZNF200P98182 395 aaPredicted RBP25.51■■□□□ 1.67
NDEL1-207ENST00000580012 PPFIA1Q13136 1202 aa25.51■■□□□ 1.67
NDEL1-207ENST00000580012 XKR3Q5GH77 459 aa25.51■■□□□ 1.67
NDEL1-207ENST00000580012 MARCH8Q5T0T0 291 aa25.51■■□□□ 1.67
NDEL1-207ENST00000580012 LMBR1Q8WVP7 490 aa25.51■■□□□ 1.67
NDEL1-207ENST00000580012 RAB34Q9BZG1 259 aa25.51■■□□□ 1.67
NDEL1-207ENST00000580012 ZSWIM4Q9H7M6 989 aa25.51■■□□□ 1.67
NDEL1-207ENST00000580012 MBLAC1A4D2B0 266 aaPredicted RBP25.5■■□□□ 1.67
NDEL1-207ENST00000580012 TLR3O15455 904 aaKnown RBP25.5■■□□□ 1.67
NDEL1-207ENST00000580012 OATP04181 439 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 GNAT1P11488 350 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 RPA1P27694 616 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 PRKCEQ02156 737 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 CEBPZQ03701 1054 aaKnown RBP25.5■■□□□ 1.67
NDEL1-207ENST00000580012 GRIK4Q16099 956 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 PTGISQ16647 500 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 ZNF484Q5JVG2 852 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 CATSPER3Q86XQ3 398 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 TUFT1Q9NNX1 390 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 FBXO2Q9UK22 296 aaPredicted RBP25.5■■□□□ 1.67
NDEL1-207ENST00000580012 TBX21Q9UL17 535 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 TRPC6Q9Y210 931 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 SRPRBQ9Y5M8 271 aaKnown RBP25.5■■□□□ 1.67
NDEL1-207ENST00000580012 STK24Q9Y6E0 443 aa25.5■■□□□ 1.67
NDEL1-207ENST00000580012 VWA3AA6NCI4 1184 aa25.49■■□□□ 1.67
NDEL1-207ENST00000580012 KIAA0355O15063 1070 aa25.49■■□□□ 1.67
NDEL1-207ENST00000580012 YEATS4O95619 227 aa25.49■■□□□ 1.67
NDEL1-207ENST00000580012 CLTBP09497 229 aa25.49■■□□□ 1.67
NDEL1-207ENST00000580012 DNM1Q05193 864 aaKnown RBP25.49■■□□□ 1.67
NDEL1-207ENST00000580012 CTTNQ14247 550 aaKnown RBP25.49■■□□□ 1.67
NDEL1-207ENST00000580012 TARBP2Q15633 366 aaKnown RBP25.49■■□□□ 1.67
NDEL1-207ENST00000580012 CKAP2LQ8IYA6 745 aa25.49■■□□□ 1.67
NDEL1-207ENST00000580012 ERMNQ8TAM6 284 aa25.49■■□□□ 1.67
NDEL1-207ENST00000580012 CEP89Q96ST8 783 aa25.49■■□□□ 1.67
NDEL1-207ENST00000580012 LXNQ9BS40 222 aa25.49■■□□□ 1.67
NDEL1-207ENST00000580012 MMTAG2Q9BU76 263 aaKnown RBP25.49■■□□□ 1.67
NDEL1-207ENST00000580012 PDLIM7Q9NR12 457 aa25.49■■□□□ 1.67
NDEL1-207ENST00000580012 DNAH12Q6ZR08 3092 aa25.49■■□□□ 1.67
NDEL1-207ENST00000580012 COL1A2P08123 1366 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 TRIM43BA6NCK2 446 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 TREHO43280 583 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 MED24O75448 989 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 XRCC6P12956 609 aaKnown RBP eCLIP25.48■■□□□ 1.67
NDEL1-207ENST00000580012 MUTP22033 750 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 CYP4A11Q02928 519 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 GRIN1Q05586 938 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 ANO5Q75V66 913 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 SH3RF1Q7Z6J0 888 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 SERINC5Q86VE9 423 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 TPH2Q8IWU9 490 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 C7orf61Q8IZ16 206 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 TRIM43Q96BQ3 446 aaPredicted RBP25.48■■□□□ 1.67
NDEL1-207ENST00000580012 AK8Q96MA6 479 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 RCOR1Q9UKL0 485 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 CFAP45Q9UL16 551 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 ATP6V1DQ9Y5K8 247 aa25.48■■□□□ 1.67
NDEL1-207ENST00000580012 PPP6R2O75170 966 aa25.47■■□□□ 1.67
NDEL1-207ENST00000580012 MARCKSP29966 332 aaPredicted RBP25.47■■□□□ 1.67
NDEL1-207ENST00000580012 LONP1P36776 959 aaKnown RBP25.47■■□□□ 1.67
NDEL1-207ENST00000580012 PTK7Q13308 1070 aa25.47■■□□□ 1.67
NDEL1-207ENST00000580012 FOXD4L6Q3SYB3 417 aaPredicted RBP25.47■■□□□ 1.67
NDEL1-207ENST00000580012 FOXD4L3Q6VB84 417 aaPredicted RBP25.47■■□□□ 1.67
NDEL1-207ENST00000580012 IPO9Q96P70 1041 aaKnown RBP25.47■■□□□ 1.67
NDEL1-207ENST00000580012 TMEM39AQ9NV64 488 aa25.47■■□□□ 1.67
NDEL1-207ENST00000580012 NR2E3Q9Y5X4 410 aa25.47■■□□□ 1.67
NDEL1-207ENST00000580012 DDX11L8A8MPP1 907 aa25.46■■□□□ 1.67
NDEL1-207ENST00000580012 PP2D1A8MPX8 630 aa25.46■■□□□ 1.67
NDEL1-207ENST00000580012 SPTLC2O15270 562 aa25.46■■□□□ 1.67
NDEL1-207ENST00000580012 CYP2C9P11712 490 aa25.46■■□□□ 1.67
NDEL1-207ENST00000580012 CDC25AP30304 524 aa25.46■■□□□ 1.67
NDEL1-207ENST00000580012 STK38Q15208 465 aa25.46■■□□□ 1.67
NDEL1-207ENST00000580012 ECM1Q16610 540 aa25.46■■□□□ 1.67
NDEL1-207ENST00000580012 TRIM71Q2Q1W2 868 aaKnown RBP25.46■■□□□ 1.67
NDEL1-207ENST00000580012 HABP4Q5JVS0 413 aaKnown RBP25.46■■□□□ 1.67
NDEL1-207ENST00000580012 DHX38Q92620 1227 aaKnown RBP25.46■■□□□ 1.67
NDEL1-207ENST00000580012 YWHABP31946 246 aaKnown RBP25.45■■□□□ 1.66
NDEL1-207ENST00000580012 RBL2Q08999 1139 aa25.45■■□□□ 1.66
NDEL1-207ENST00000580012 HYIQ5T013 277 aa25.45■■□□□ 1.66
NDEL1-207ENST00000580012 KRT79Q5XKE5 535 aa25.45■■□□□ 1.66
NDEL1-207ENST00000580012 HAUS3Q68CZ6 603 aa25.45■■□□□ 1.66
NDEL1-207ENST00000580012 MTHFD1LQ6UB35 978 aa25.45■■□□□ 1.66
NDEL1-207ENST00000580012 RPAINQ86UA6 219 aa25.45■■□□□ 1.66
NDEL1-207ENST00000580012 TRAPPC12Q8WVT3 735 aa25.45■■□□□ 1.66
NDEL1-207ENST00000580012 NOC4LQ9BVI4 516 aaKnown RBP25.45■■□□□ 1.66
NDEL1-207ENST00000580012 ANKEF1Q9NU02 776 aa25.45■■□□□ 1.66
NDEL1-207ENST00000580012 PCDHA2Q9Y5H9 948 aa25.45■■□□□ 1.66
NDEL1-207ENST00000580012 ZBTB39O15060 712 aa25.44■■□□□ 1.66
NDEL1-207ENST00000580012 SLC26A4O43511 780 aa25.44■■□□□ 1.66
NDEL1-207ENST00000580012 KLRC1P26715 233 aa25.44■■□□□ 1.66
NDEL1-207ENST00000580012 TRMT1LQ7Z2T5 733 aaKnown RBP25.44■■□□□ 1.66
NDEL1-207ENST00000580012 KRI1Q8N9T8 703 aaKnown RBP25.44■■□□□ 1.66
NDEL1-207ENST00000580012 WNT8BQ93098 351 aa25.44■■□□□ 1.66
NDEL1-207ENST00000580012 CHAMP1Q96JM3 812 aa25.44■■□□□ 1.66
NDEL1-207ENST00000580012 CSRNP2Q9H175 543 aa25.44■■□□□ 1.66
NDEL1-207ENST00000580012 TUBE1Q9UJT0 475 aa25.44■■□□□ 1.66
NDEL1-207ENST00000580012 PPME1Q9Y570 386 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms