RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 MTIF3Q9H2K0 278 aaKnown RBP16.32■□□□□ 0.2
MKS1-207ENST00000578789 VAV3Q9UKW4 847 aa16.32■□□□□ 0.2
MKS1-207ENST00000578789 SAMM50Q9Y512 469 aa16.32■□□□□ 0.2
MKS1-207ENST00000578789 CHMP2AO43633 222 aa16.31■□□□□ 0.2
MKS1-207ENST00000578789 NBNO60934 754 aa16.31■□□□□ 0.2
MKS1-207ENST00000578789 RPLP2P05387 115 aaKnown RBP16.31■□□□□ 0.2
MKS1-207ENST00000578789 SMAD3P84022 425 aaKnown RBP16.31■□□□□ 0.2
MKS1-207ENST00000578789 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
MKS1-207ENST00000578789 MBTPS1Q14703 1052 aa16.31■□□□□ 0.2
MKS1-207ENST00000578789 RUFY4Q6ZNE9 571 aa16.31■□□□□ 0.2
MKS1-207ENST00000578789 BBXQ8WY36 941 aaPredicted RBP16.31■□□□□ 0.2
MKS1-207ENST00000578789 HAS1Q92839 578 aa16.31■□□□□ 0.2
MKS1-207ENST00000578789 GABBR1Q9UBS5 961 aa16.31■□□□□ 0.2
MKS1-207ENST00000578789 KIF3AQ9Y496 699 aa16.31■□□□□ 0.2
MKS1-207ENST00000578789 RSPH10B2B2RC85 870 aa16.3■□□□□ 0.2
MKS1-207ENST00000578789 WNT7AO00755 349 aa16.3■□□□□ 0.2
MKS1-207ENST00000578789 RSPH10BP0C881 870 aa16.3■□□□□ 0.2
MKS1-207ENST00000578789 CUL4AQ13619 759 aa16.3■□□□□ 0.2
MKS1-207ENST00000578789 UGCGQ16739 394 aa16.3■□□□□ 0.2
MKS1-207ENST00000578789 ZNF484Q5JVG2 852 aa16.3■□□□□ 0.2
MKS1-207ENST00000578789 FAM26DQ5JW98 314 aa16.3■□□□□ 0.2
MKS1-207ENST00000578789 MIER3Q7Z3K6 550 aa16.3■□□□□ 0.2
MKS1-207ENST00000578789 SLFN12Q8IYM2 578 aa16.3■□□□□ 0.2
MKS1-207ENST00000578789 FAM167AQ96KS9 214 aa16.3■□□□□ 0.2
MKS1-207ENST00000578789 CXXC1Q9P0U4 656 aaPredicted RBP16.3■□□□□ 0.2
MKS1-207ENST00000578789 GBF1Q92538 1859 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 ZBTB42B2RXF5 422 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 ZNF862O60290 1169 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 NEMFO60524 1076 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 BAIAP3O94812 1187 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 ACTN1P12814 892 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 GJB2P29033 226 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 IGBP1P78318 339 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 PRKCEQ02156 737 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 MGAT3Q09327 533 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 MTHFD1LQ6UB35 978 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 OTOP2Q7RTS6 562 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 NOSTRINQ8IVI9 506 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 TRAPPC12Q8WVT3 735 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.29■□□□□ 0.2
MKS1-207ENST00000578789 PCDHA2Q9Y5H9 948 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 PTPRSQ13332 1948 aa16.29■□□□□ 0.2
MKS1-207ENST00000578789 MICAL3Q7RTP6 2002 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.28■□□□□ 0.2
MKS1-207ENST00000578789 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.28■□□□□ 0.2
MKS1-207ENST00000578789 KIF28PB7ZC32 967 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 EML1O00423 815 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 OATP04181 439 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 CTSHP09668 335 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 U2AF2P26368 475 aaKnown RBP eCLIP16.28■□□□□ 0.2
MKS1-207ENST00000578789 SPIRE1Q08AE8 756 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 ORC2Q13416 577 aaPredicted RBP16.28■□□□□ 0.2
MKS1-207ENST00000578789 CNKSR3Q6P9H4 555 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 CKAP2LQ8IYA6 745 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 ZBTB10Q96DT7 871 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 FTOQ9C0B1 505 aaKnown RBP eCLIP16.28■□□□□ 0.2
MKS1-207ENST00000578789 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
MKS1-207ENST00000578789 LAMA3Q16787 3333 aa16.27■□□□□ 0.2
MKS1-207ENST00000578789 SMIM35A0A1B0GVV1 85 aa16.27■□□□□ 0.2
MKS1-207ENST00000578789 BAG4O95429 457 aaKnown RBP16.27■□□□□ 0.2
MKS1-207ENST00000578789 C22orf31O95567 290 aa16.27■□□□□ 0.2
MKS1-207ENST00000578789 KLRC1P26715 233 aa16.27■□□□□ 0.2
MKS1-207ENST00000578789 TRAPPC10P48553 1259 aa16.27■□□□□ 0.2
MKS1-207ENST00000578789 CALCRLQ16602 461 aa16.27■□□□□ 0.2
MKS1-207ENST00000578789 FAM109BQ6ICB4 259 aaPredicted RBP16.27■□□□□ 0.2
MKS1-207ENST00000578789 DNAJB3Q8WWF6 145 aa16.27■□□□□ 0.2
MKS1-207ENST00000578789 MTMR9Q96QG7 549 aa16.27■□□□□ 0.2
MKS1-207ENST00000578789 SMC3Q9UQE7 1217 aa16.27■□□□□ 0.2
MKS1-207ENST00000578789 EVPLQ92817 2033 aa16.26■□□□□ 0.19
MKS1-207ENST00000578789 ZBBXA8MT70 800 aa16.26■□□□□ 0.19
MKS1-207ENST00000578789 STBD1O95210 358 aa16.26■□□□□ 0.19
MKS1-207ENST00000578789 CHRNA1P02708 482 aa16.26■□□□□ 0.19
MKS1-207ENST00000578789 MKRN4PQ13434 485 aaPredicted RBP16.26■□□□□ 0.19
MKS1-207ENST00000578789 GNL2Q13823 731 aaKnown RBP16.26■□□□□ 0.19
MKS1-207ENST00000578789 TCTN1Q2MV58 587 aa16.26■□□□□ 0.19
MKS1-207ENST00000578789 PLEKHG4Q58EX7 1191 aa16.26■□□□□ 0.19
MKS1-207ENST00000578789 SLC9A7Q96T83 725 aa16.26■□□□□ 0.19
MKS1-207ENST00000578789 NRBP2Q9NSY0 501 aa16.26■□□□□ 0.19
MKS1-207ENST00000578789 SLC4A7Q9Y6M7 1214 aa16.26■□□□□ 0.19
MKS1-207ENST00000578789 KDM3AQ9Y4C1 1321 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 ARID2Q68CP9 1835 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 TMEM265A0A087WTH1 108 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 MARCH6O60337 910 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 EFCAB14O75071 495 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 PSMC5P62195 406 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 MRPS6P82932 125 aaKnown RBP16.25■□□□□ 0.19
MKS1-207ENST00000578789 EPHA7Q15375 998 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 TARBP2Q15633 366 aaKnown RBP16.25■□□□□ 0.19
MKS1-207ENST00000578789 XKR3Q5GH77 459 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 NME8Q8N427 588 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 LINC01465Q8N7H1 131 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 NIFKQ9BYG3 293 aaKnown RBP16.25■□□□□ 0.19
MKS1-207ENST00000578789 OSBPL7Q9BZF2 842 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 FAM49AQ9H0Q0 323 aaPredicted RBP16.25■□□□□ 0.19
MKS1-207ENST00000578789 TMEM60Q9H2L4 133 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 NOL7Q9UMY1 257 aaKnown RBP16.25■□□□□ 0.19
MKS1-207ENST00000578789 CDY2AQ9Y6F7 541 aa16.25■□□□□ 0.19
MKS1-207ENST00000578789 LOXHD1Q8IVV2 1947 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms