RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-204	ENST00000577664	GH1	P01241	217 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	AKR1A1	P14550	325 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SMPD1	P17405	629 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ADCYAP1R1	P41586	468 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ME1	P48163	572 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	UBE2H	P62256	183 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	TNFAIP2	Q03169	654 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ARHGAP1	Q07960	439 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	RESP18	Q5W5W9	173 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SHC4	Q6S5L8	630 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ABHD15	Q6UXT9	468 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	NEK9	Q8TD19	979 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	CLIC6	Q96NY7	704 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	MMTAG2	Q9BU76	263 aa	Known RBP	12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	BCAS3	Q9H6U6	928 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	GDPD2	Q9HCC8	539 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	JPH1	Q9HDC5	661 aa	Predicted RBP	12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SLC9A2	Q9UBY0	812 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	LRWD1	Q9UFC0	647 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	HPSE	Q9Y251	543 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SPTBN4	Q9H254	2564 aa		12.51	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	PRRC2B	Q5JSZ5	2229 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	GSTTP1	A0A1W2PQM5	241 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664		A6NJR5	290 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	GOLGA6L22	H0YM25	854 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	EML1	O00423	815 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ADCY6	O43306	1168 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	MARCH6	O60337	910 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	PPFIA4	O75335	1185 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	PRPF40A	O75400	957 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	LYPLA2	O95372	231 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	CCNE2	O96020	404 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	XRCC6	P12956	609 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	RPA1	P27694	616 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	JAK3	P52333	1124 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	TMEM240	Q5SV17	173 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	C16orf59	Q7L2K0	433 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	CYFIP1	Q7L576	1253 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	DHX37	Q8IY37	1157 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	PPTC7	Q8NI37	304 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SEPT1	Q8WYJ6	367 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	GJA10	Q969M2	543 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	UPF3A	Q9H1J1	476 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	UNC45A	Q9H3U1	944 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	PCDHA10	Q9Y5I2	948 aa		12.5	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	C5orf42	Q9H799	3197 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	WDR64	B1ANS9	1081 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	LGR5	O75473	907 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SLITRK3	O94933	977 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	GGPS1	O95749	300 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	P4HB	P07237	508 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SPATA31C1	P0DKV0	1188 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	PTMS	P20962	102 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	GJA9	P57773	515 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ACTR2	P61160	394 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	HSDL1	Q3SXM5	330 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	TMEM63B	Q5T3F8	832 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ENGASE	Q8NFI3	743 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	AFAP1L1	Q8TED9	768 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	GPR20	Q99678	358 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	PYM1	Q9BRP8	204 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	MLXIP	Q9HAP2	919 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	TUFT1	Q9NNX1	390 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	DISC1	Q9NRI5	854 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	MSRA	Q9UJ68	235 aa		12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	POTEM	A6NI47	508 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	CTAGE5	O15320	804 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	CST5	P28325	142 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	CNGA1	P29973	690 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SLC26A2	P50443	739 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	KRT79	Q5XKE5	535 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	HAUS3	Q68CZ6	603 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	USP49	Q70CQ1	688 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	PLPPR4	Q7Z2D5	763 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	CATSPER3	Q86XQ3	398 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ERMN	Q8TAM6	284 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	COPS5	Q92905	334 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	EPSTI1	Q96J88	318 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	TOX2	Q96NM4	488 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	EIF2AK1	Q9BQI3	630 aa	Known RBP	12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SLC28A3	Q9HAS3	691 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	CACNA1B	Q00975	2339 aa		12.48	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	EMSY	Q7Z589	1322 aa		12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	DDX11L8	A8MPP1	907 aa		12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	KPNA6	O60684	536 aa		12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	DKC1	O60832	514 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	GADD45B	O75293	160 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	PSAP	P07602	524 aa		12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SUPT20HL2	P0C7V6	817 aa		12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	ALAD	P13716	330 aa		12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	UBA7	P41226	1012 aa		12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	SNW1	Q13573	536 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	CCSAP	Q6IQ19	270 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	MIS18BP1	Q6P0N0	1132 aa		12.47	□□□□□ -0.41
CDK5RAP3-204	ENST00000577664	MIER3	Q7Z3K6	550 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms